Detail



ID : Ahg892827

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|892827|Al_scaffold_0006_823
Sequence
GGCCATTTGG GCTTTACGTT TATCCCTGAA ATAAAATTCA ACTTTGTACC CACTGATAAG TTTGGATACA TACGTAAATC AGAAAGACCT TTATTGTGTT ATTTCATTCC AGATGTTATC GGTGTTGTTC AAATTGTTTC TCCTAACAAT AGCATTAGAC GGAGGAATGA CAATGAGTTG ATCCCAAAGA GGGATATAAC TGTAGCCGAT GAGACAAAGA AAACTGTTGT GGTGTCCCTT TGGAATGATC TACCAACTGG CATAGGCCAA GAACTGCTAG ACATGGCTGA TAAATCTCTC AAAGCTGGAG ATTTTCAACT GGGAGACAGA AAAGTTGAGG ACATAATTAG CTGCATAGTT GATGAACCCA ATAAACTAAA ATCAGAGGAA GGTGGAGTGA ATGAGTTTCA GACAAAGATG AAAGAAGTTA TTTGGTCACC TCATCTCTTC CGGATCAGTG TTTCTCAGCA AGAGTATAAC AGGGAGAAGA GACAGACGAC TACTGTAAGA GGTGTTTCTC CAATTGACTT TACTGCTGAA ACAAGATTAT TGCTCCAAGA CATCTCCAAG AACAAGACAT CTTGGTAA 
Length588
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3527744.. 3529155
Download Sequence
A.thaliana
AGI-codeAT5G08020.1
DescriptionRPA70-kDa subunit B
TAIR curator summaryEncodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair.
Alias[ATRPA70B][RPA70B][ARABIDOPSIS THALIANA RPA70-KDA SUBUNIT B][RPA70-kDa subunit B]
Gene coexpression
MR
MR Locus Description
7.2111 Ahg898672
7.93725 Ahg925923 pleiotropic drug resistance 6
8 Ahg926205
8.18535 Ahg492697
9.27362 Virus1052
11.3578 Virus1078
12.7279 Ahg481692 Cation/hydrogen exchanger family protein
13.4164 Ahg952246
13.7477 Ahg892759 Defensin-like (DEFL) family protein
15.9687 Ahg923513 Cation efflux family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression