Detail


ID : Ahg895001

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|895001|Al_scaffold_0006_2997
Sequence
ATGTCTAAGA ATGAGTGGAT AGATGCGCTA CCACTGTTAA GGAATAACTT TGATGGAGAA ATTGAGAGCA TTTTGAAGTT CAGTTATGAT GCCTTATGTG ATGAATATAA AAATTTATTC CTTCATATAT CTTGTCTTTT TAACCTTGAA TATGTCGAGA GAGTGGAAAT GCGTCTTGCA CATAAGTTCT CCAACATCGG TCAAGGGCTT CGAGTCTTAG CAGATAAATC TCTCATTTCT TTTAGTGAAA ATGGATGGAT ATTGATGCAT GATCTTCTAG TACAACTGGG CACAAAAATT GTCAGTCACA AGCCTGGGCA CCAATCTATT CGTGAGCCTG GGAAGCAATG GGATTTTTTT CCGATGACAT CTTTGCCTTC CAACTTTTGT ACGGCGTACC TTGTTGAACT AAGTATGCGA GATAGTAAAC TTCAGAAGCT GTGGGAAGGA AATCGGCCTC TGCGAAACCT CAAGCGGATG GATTTGTCGG AGTCGACCAA CCTAAAGAAG CTACCTGATC TCTCAACTGC TAGTAACCTC ATATTATTGT ATCTTAATGA ATGCACAAGT TTGGTGGAGC TTCCCTCCTC GATTGGTAAT GCAATAAATC TCAAGAGCTT GTATCTTACT GGTTGTTCAG GTTTGGTGAA GCTCCCGTCC TCGATTGGAA ATGCAACAAA TCTTCAGAAC TTGTATTGTC ATAATTGTTC AAGTCTGGTG GAGCTGCCCT TCTCTATTGG AAATGCAACA AATCTCCGGT GCTTGTACCT TGTGAACTGC TCAAGTATGG TGGAGTTGCC ATCTTCTATT GGAAACCTTC ATCAATTGGT AGAGTTGAAT TTAAAGGGAT GCTCGAAACT AGAGGTTCTT CCTACCAAAA TCAACTTGGA ATCCCTCTAT ATACTTGATC TCACTGATTG CTTAATGTTG AAAAGTTTTC CTGAGATCTC CACAAACATT AAAGTTCTCA AGCTCATGGG AACTGCAATT AAAGAAGTGC CTTTGTCGAT CAAGTTATGG TCTCGTCTTT GCGACTTGGA AATGTCATAC AATGAAAACC TCAAGGAACT CCCGCATGCT CTTGGTATCA TCACAACGTT GTACATCAAA AATACAGAAA TGCGAGAGAT TCCTCTATGG GTAAAGAAAA GCTCTTGTCT TCGGGAACTT AAACTCATCG GATGCAAAAA GCTGGTATCA CTCCCACAAC TTTCAGACTC TTTATTATAT CTAGAGGTTG AAAATTGCGA GTCACTGGAG AGACTCGATT GCTCATTTAA TAATCCAAAG ATATCTCTCA AGTTTTTTAA TTGCATCAAA CTAAATAAAG AAGCGAGGGA TCTCATTATC AAGACTAGTA CTAACTATGC AGTCTTACCT AGTAGAGAAG TGCCTGCGAA CTTCACTTAC CGAGCTAATA CTAGAAGTTT CATGACAATA AGTTTCAATC AAAGGGCTCT TTCTACAACC TCGAGATTCA AGGCTTGCAT CTTCCTAGTT TATAGAGGTG ACAAGGAAGA GGAGGCTAAT GTTAGAGAAA TAACAATATC TTATCGCATC GAGGAGAAAC ATAGTCTTGA CGTCTTTGTT CCATATAGAC ATGCAAAGTA CTATACTGCA TCTTCCACGT TAACGAAGCA TCTGTTTATC TTTGAATTTG AAGCGGATGT GACATCCAAC GAGCTTTTCT TTCATTTCAA AACCGGATGT GAAGAAGTAT TGATAGAAGA TTATGGAGTA CTCCAACTCT AA
Length1752
Protein Sequence
Protein Residue
Map Locationscaffold_6: 17887219.. 17889490
Download Sequence
A.thaliana
AGI-codeAT5G38350.1
DescriptionDisease resistance protein (NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.8997 Ahg324722
24.1868 Ahg497429 Oleosin family protein
37.1483 Ahg494054 Protein of unknown function (DUF1163)
44.2493 Ahg475442
47.1487 Ahg899869 SU(VAR)3-9 homolog 7
49.6387 Ahg352442
56.9912 Ahg941700
78.1345 Ahg317898 Protein of unknown function (DUF567)
80.3492 Ahg480571 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
81.939 Ahg477926 galacturonosyltransferase-like 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression