Detail



ID : Ahg897454

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|897454|Al_scaffold_0005_1420
Sequence
ATGGATAGTT TCCATGGGAT TTTGTTGGTC GCAGTTGTAA CTTTTGCTAT AATTCACTTT GTTCAAGCTC AGGATGAAGG GTTTATCAGT TTGGATTGCG GGTTATCTCC GAACGAACCG TCTCCTTATA CCGAATCTGC AACTGGATTA CAGTACACAT CAGATTCAAA CTTTATCCAA ACTGGAAAAA TTGGTAGGAT TCAGAGAAAT CTTGAAGCAA ATTACCTAAA GCCCCAGATG ACGGTCAGAT ACTTTCCAGA CGGAATACGC AACTGTTATA ATATTACGGT GATGCAAGGA ACCAACTATC TAATCAGAGC TAGAGCAATA TATGGGAATT ATGATAGTCT TAACATTTAT CCTAAGTTTG ACTTGTACAT AGGCCCTAAC TTCTGGGCAA CAATAGACAT TGGAAAATAT GTAAACGGTA CAAGGGAGGA AATCAATTAC ATCCCTAAAT CAAACATTTT AGATCTATGT CTTGTTAAGA CAGACGATAC TACACCATTT ATATCGACCT TCGAGATAAG ACCTCTGCCA AATGATAGTT ACATCACCAC ATCTGGTCCG TTGAAGATGT TTTCGCGGTA TTATTTAACG GATTCAGAAG ACTATCTAAG GTACCCTGTG GATGTCTATG ATAGAATATG GAATTCATAC ACTGAGACAG ACTGGAAGCA GATATCCACT AGTCTTACAG TGAACACTTC CAATAGTTTC CGTCTTCCTC AGGATGCTCT CAAAACCGCT GCAACACCGG TGAATGCGAG TGCACCGTTG ATAGATATCG AGTATCCGGA TTCCTCTAAT GATAAAGTTT ACATTTACCT TCACTTTGCT GAGGTTCAAG TCTTAAAGGC CAATGAGACT AGAGAGTTTG AAATTTCTGT GAACGGAGAA TCCCTTGACG ACTCCTATAG GCCTTTATAT CTGCAATCAG AAACGGTACA AACTCCGTCT CCAATTATTT GCGAAGACAA AGAATGCGTC GTTAAGCTGA CAAAATCAGG GAAGTCTACA CACCCACCTC TGCTTAACGC CGTCGAAGGT TTTGCGGTTG TAGATTTTCT ACAATCTGAA TCAGATGAAA ATGATGTGAT CGCTATTAAA AACATCAGAG CCGTCTATGG AGTGAATAAA GTGTCATGGC AAGGTGATCC ATGTGTTCCT AGGCAGTTTT TGTGGGATGG TCTAAATTGT AGTAGCACGG ATAAGTCTAC ACCATCAAGA ATCACTTCAT TAAACTTGTC TTCAAGCGGG TTAACGGGAA CTATAGACGC TGGAATTCAA AATCTAACAC ACCTAGAAAA ATTGGACTTG TCAAATAATA GTTTGACTGG AGCAATCCCC GAATTTCTAG CTAACATGAA ATCATTGTTG ATCATAAATT TGAGCAAGAA CAATTTGAAT GATTCAATTC CACAAGCTCT TCTCAATAGA GAAAAGGAAG GACTGAAATT AATTGTTGAT GGACATGGGA TAAATCAATG TCTGCCTGGT TCATGTGCCC CAAAAAAGAA TTTTCCAGTG ATGATTGTTG CACTGGTTGC TACAGCGGTG GCGGTAATAA TCGTAGTGGT GATGATTCTC GTTTGTGTGT TAAGAAAGAA AAAGACATCA AGTCATGTGG AAGCTAATAC CCCTTCAGTA ATTACGCCGC GGGCGAACTT CACACACACT AGTATGTCAG AGACATCAAT CGAGACAAAA GAAAGAAGGT TTAGTCATAC AGAGGTTATA CAAATGACAA ACAAGTTCGA AAGAGCTCTA GGCGAAGGAG GGTTTGGTAT CGTTTATCAT GGATATATAA ACGGTTCACA GCAAGTAGCT GTTAAAGTAC TTTCTGAATC ATCATCACAA GGTTATAAAG AGTTCAAAGC AGAGGTTGAA CTTCTTTTAA GAGTTCACCA CATAAATTTG GTAAACCTTG TTGGGTATTG TGATGAACGA GGTCACTTGG CTCTCATCTA CGAATACATG TCCAATGGAG ACTTAAAAGA ACATTTGTCA GGAAAACGCG GTGGCCCTTT GAATTGGAGT ACTCGATTAC GAATAGCTGC TGATGCTGCA CTAGGATTGG AGTACTTACA TACTGGGTGC CAACCATCAA TGGTGCACAG AGATGTCAAA TGTACGAACA TATTGTTGGG AGAGCAGTTC TCAGGCAAAA TTGCAGATTT TGGTCTTTCA AGATCTTTCC AACTCGGAGA TGAATCCCAT GTTTCAACCG TTGTTGCGGG TACTCCTGGA TATCTTGACC CTGAATATTA CAGAACAGGT CGGTTGGCGG AAACTAGTGA TGTATATAGT TTTGGGATTG TATTGTTGGA AATGATCACA AACCAACGTG TGATTGATCA AACCCGCAAA AAGTCCCACA TAACAGAATG GACGGCATTT ATGCTTAATA GAGGAGATAT TACTAGGATC ATGGATCCTA ACCTCCACGG TGATTACAAC TCTCGTTCTG TTTGGAGAGC TCTTGAATTG GCTATGTTGT GCGCAAACCC TTCTTCAGAA AATAGACCAA GCATGTCCCA AGTTGTTATC GAACTGAAAG AGTGTCTTAC TTCTGAAAAA TCGATGAAAG GTAAGAATCA AGACACAGAC TCTCATAGTT CCTTTGAAAT GAGCATGAGC TTTGACGCAA AAGCTGTGCC TAGTGCAAGG TAG 
Length2673
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11991430.. 11995874
Download Sequence
A.thaliana
AGI-codeAT3G46340.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
33.8378 Ahg935611 cyclic nucleotide gated channel 3
45.5631 Ahg942355 carbon/nitrogen insensitive 1
58.3009 Ahg485163
69.6994 Ahg902874 Cysteine proteinases superfamily protein
76.0789 Ahg492857 VACUOLAR SORTING RECEPTOR 7
78.2624 Ahg943050 Molybdenum cofactor sulfurase family protein
79.9062 Ahg494374 peptide transporter 3
83.5464 Ahg331872 Protein of unknown function (DUF295)
87.9886 Ahg889845 cysteine-rich RLK (RECEPTOR-like protein kinase) 16
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression