Detail



ID : Ahg897888

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|897888|Al_scaffold_0005_1854
Sequence
ATGGATTACT TGCATTTCTT GTGCGCTTCA AATTACACCT CCTCCCAGAT TAAGATCATC ACGAGAATTG AATTTTCCTG TGACCGGAGC AAGGAGTACA GGATTTCCGA GCTCAACTAT CCGTCGTTTG CAGTCACGAT CAACAGAGGT GGAGGCGGCG CGTACACATA CACGCGTATC GTAACGAGCG TGGGAGGAGC TGGAACTTAC ACGGTTAAAG TCATGTCTGA TGTTAAGGCG GTCAACATTT CGGTCGAACC GGCGGTTTTG GATTTCAATA ATGTCAATGA GAAGAGATCG TATTCGGTTA TCTTCACCGT GAATCCATCA ATGCCTTCTG GAACCAACAG CTTTGGTAGC ATTGAGTGGT CGGATGGCTT CAACGATGAT AACTCCGTCG TATCTCTTCA CCCTGCAACC ATGGAGAAGC TTCAGCTCTT CCGTGATGAT ACCATTCTCT TCAAGGTTTG GTTTGCTTTT CTTCGTTTGG ATTCCGAGCT CAACTATCCG TCGTTTGCAG TCACGATCAA CAGAGGTGGA GGCGGCGCGT ACACATACAC GCGTATCGTA ACGAGCGTGG GAGGAGCTGG AACTTACACG GTTAAAGTCA TGTCTGATGT TAAGGCGGTC AACATTTCGG TCGAACCGGC GGTTTTGGAT TTCAATAATG TCAATGAGAA GAGATCGTAT TCGGTTATCT TCACCGTGAA TCCATCAATG CCTTCTGGAA CCAACAGCTT TGGTAGCATT GAGTGGTCGG ATGGTAAACA CTTGGTTCGA AGCCCCGTGG CTCTAACCTG GACTTAA 
Length807
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14075838.. 14081478
Download Sequence
A.thaliana
AGI-codeAT3G09840.1
Descriptioncell division cycle 48
TAIR curator summaryEncodes a cell division cycle protein, a member of AAA-type ATPases gene family. Expressed throughout the plant in regions of cell division. Within the cell, sub-cellular localization varies depending on the stage of the cell cycle.Mutants in which the expression of CDC48A is altered show defects in cytokinesis, cell expansion and cell differentiation.
Alias[ATCDC48][CDC48][CDC48A][cell division cycle 48]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg938032 PIF1 helicase
2.44949 Ahg946057 RNI-like superfamily protein
3 Ahg950804 Defensin-like (DEFL) family protein
4 Virus0447
4 Virus0440
5.91608 Ahg932926
6.9282 Ahg475944 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
7.07107 Ahg936814
7.07107 Ahg936795
8.06226 Ahg343542
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression