Detail



ID : Ahg899847

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|899847|Al_scaffold_0004_497
Sequence
ATGAGAAACA AGAAAGTTTT CTTCTTCATC TTGCTCTTCT TCTTCTCCTC CTTCAAGGTG GAAGTCAGTA GAGGACAGAA CAACGGAAGA ACCAAAGTCA ATGTCGGTGT TGTAACAGAT GTTGGAACTT CATACTCGGA CGTTGCCATG CTCTGCATCA ACATGTCTCT AGCCGATTTC TACTCTTCTC GTCCCCAATT CCAGACAAGG CTTGTCGTCA ACGTTGGCGA CTCCAAAGAA GACGTCGTCG GTGCCGCATC TGCAGCTATT GAGCTGATAA AGAACAAGAA AGTGAAAGCG ATTTTGGGGC CATGGACTTC AATGCAAGCT CATTTTTTGG TTGAGATTGG CCAAAAGTCA CGAGTTCCGA TTATTTCCTA CTCTGCAACA AGCCCGTTTC TTACATCTCT CCGTAGTCCA TACTTCCTTC GTGCTACATA CGAGGACTCC TCTCAAGTAA ACGCCGTAAA AGCTATTATC AAGTTGTTTG GCTGGCGAGA AGCTGTACCT GTTTACGTAG ACAACACGTT TGGAGAAGGT ATAATGCCTC GTCTCACAGA TGCATTACAA GAAATTAATG TTCGAATACC TTATAGATCT GTTATCGCTC TCAATGCCAC GGATCAAGAT ATCTCCGTGG AGCTTCTCAA AATGATGACC ATGCCCACTA GAGTCTTCAT TGTCCACATG TACTCTTCTC TTGCCTCAAG AGTCTTTATA AAAGCTAAGG AGATTGGTTT GATGAAACCA GGATATGTAT GGATCCTTAC CAATAGTGTA ACCGATGACT TAGCTACGAT GAATGAGACG GATGTTGAGG CTATGGAGGG CGTACTTGGT GTTAAAACTT ATATTCAGAA ATCCATAGAG CTGGACAACT TTAGATCACG ATGGAGGAAG AGTTTCCCAC AGATTGAGCT GAGTGTCTAT GGATTGTGGG CTTATGATGC TACCACCGCA CTAGCGATAG CTGTTGAAGA AGCTGGAATA GATAACATGA CTTTCAGTAA TGTGGATCTT GGAAGGGATG TTTCTGAACT TGAAGTTCTT GGTTTATCTC AATACGGTCC AAAGCTTCTC CAGACACTCT CAACAATTCA GTTCAAAGGA CTCGCTGGAG ATTTTCGTTT TGTTAACAGG CAACTACAGC CATCGGTGTT TGAGATTGTT AATGTAATCG GGACAAGGGA AAGCATAGGT ACTTTATCAA CTTGGCAAGA TCATCTTAAG TTGATAATAT GGCCTGGAGA GGCTAATTCT GTTCCCAAAG GATGGGAGAT CCCAACGAAC GGGAGGAGGT TGCGCATTGG AGTTCCAAAG AGAACCGGTT ACACCGATCT TGTAAAAGTC ACAAGGGATC CTATCACCAA TTCACCAGTA GTTACAGGTT TCTGCATAGA TTTCTTTGAG GCTGTGATTC GAGCAATGCC TTATGACATC TCTTACGATT TTATTCCTTT TGAAACTCCT GATGGTAAAC CAGCTGGGGA CCACAACTCT CTAGTATACC AAGTCTACCT CGGGATATAT GACGCGGTTG TGGGAGATAC GACTATACTA GTAAACAGGT CCTCTTATGT CGACTTCACA TTTCCGTTCA TTAAATCAGG TGTGGGATTG ATTGTTCCCG TCGAAGACCA AGTAAAAAGA GACAGTATTA GTTTCTTGAA GCCTTTAACA TGGAAACTGT GGATGACTAC ATTTCTCTTC GTCTTTCTAA TTGGATTTAC TGTTTGGGCT GTTGAACATA GGGTTAACCC GGACTTCCGT GGACCACGTA GGTACCAAGC TAGTACAATC TTCTGGTTTG CTTTCTCTAC CATGGTTTTT GCTCCAAGTA AAATTCAGTC TCCCATTGTA CATATCTCAA CACATAGTGA TTGTTATATA TATACTTTCC TTAATGCTTA CTCTATCGAA TTGCGGTTTG TAGGAGAAAG AGTATTCAGT TTTGGAGCTA GGCTTTTGGT TATAACATGG TACTTCATCG TGCTCTTGTT GACTCAAAGT TACACCGCCA GCTTGGCGTC CCTTTTGACA TCACGACAAC TTGATCCAAC CATAACTAGC ATGAGAAGTT TGCTTGAGAA AGGAGAAAAT GTGGGATATC CAAGGACATC ATTCATCTTT GGAAAACTTA AAGAATCGGG TTTCACTCGA TCCAGCCTCA TACCCTTTGA TAGCGCGGAA GACTGCGACA AGCTTTTGAG AAAAGGATCT GAAAAAGGGG GTGTTGCTGC AGCTTTCTTG GAAGTACCCT ACATGAGGCT CTTTCTTGGA CAATACTGCA ACGCTTATCA AATGGTTGAA GAACCCTTTA GCGTTGATGG ATTCGGCTTC GTTTTTCCAA TTGGATCACC TCTGGTTGCT GATGTATCAA GGGCCATCCT AAAAGTGGCA GAATCACCAA AAGGGAAGGA GCTTGAGCTC GCGTGGTTCA AAAAGAAAGA AGAAACATGT CCAAATCCAG TCACAACCGC AGATCCAAAT CCGTCTATTT CATCGAGGCA GCTCGGCGTA GACAGTTTCT GGGTTTTGTT TCTCATTGCT TTCCTAATGT GTGTTTTCAC CCTTGGAAAG TTCGCTTTCT TTTTTGTCAA GAATAATCAG GGTAATAGTC TGTGGCAAGA GTTTCATGAA CCAGATGAAA TTTCGTATAT CAACAACGTG GAGAAATGTC CGTGTTCGTT AAACCAAGAA GATGTAATAA ATCCACCTGC TGATGATGAT ATTCATCAAG ACACAAGGGA GCAACTATAA 
Length2760
Protein Sequence
Protein Residue
Map Locationscaffold_4: 2962652.. 2965738
Download Sequence
A.thaliana
AGI-codeAT2G24720.1
Descriptionglutamate receptor 2.2
TAIR curator summarymember of Putative ligand-gated ion channel subunit family
Alias[ATGLR2.2][GLR2.2][glutamate receptor 2.2]
Gene coexpression
MR
MR Locus Description
23.3666 Ahg907099 Calcium-dependent lipid-binding (CaLB domain) family protein
44.0227 Ahg924088
45 Ahg946777 cytochrome P450, family 71, subfamily A, polypeptide 27
47.0213 Ahg932542 RNI-like superfamily protein
77.8203 Ahg351609 Protein of Unknown Function (DUF239)
79.4292 Ahg916557
80.9938 Ahg932966
98.326 Ahg355720
99.7196 Ahg902963 Protein of unknown function (DUF569)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression