Detail



ID : Ahg900531

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|900531|Al_scaffold_0004_1181
Sequence
ATGTCTCTTG CAACCACAAT GATCGCTATC TTTCTTCAAA TCATTACATA TTTTCTCTTT ACCACCACAG CCTCACCACC TCACGGCTTC ACCATCGACT TGATCCACCG TCGCTCTAAT GCATCTTCTT CTCGAGTCTC TATTACTCAG GCCGGATCAC CTTATGCTGA TACCGTCTTT GATACCTACG AGTACCTGAT GAAACTACAA ATCGGTACTC CTCCTTTCGA GATCGAAGCG GTCTTAGACA CAGGAAGCCA GCTCATATGG ACACAATGTT TGCCTTGTCT TCACTGCTAC GACCAAAAGG CTCCCATATT CGACCCTTCG AAATCCTCAA CCTTCAAAGA GACAAGATGC AACACACCTG ACCACTCTTG TCCTTACAAG CTTGTCTACG ACGACAAAAG CTACACCCAG GGAACCTTAG CGACCGAGAC AGTCACAATC CATTCCACTT CAGGAGTTCC CTTTGTGATG CCTGAAACAA TTATTGGTTG TAGCCGCAAC AACTCAGGGT CAGGGTTTAG ACCGAGTTCT TCGGGCATTG TTGGTCTAAG CAGGGGTTCT TTATCCCTCA TCAGTCAGAT GGGCGGGGCA TACCCAGGAG ATGGGGTTGT ATCAACTACT ATGTTTGCCA AGACCGCGAA ACGAGGTCAC TATTACCTAA ACCTAGATGC GGTCAGCGTT GGGGACACCC GCATTGAGAC AGTGGGAACA CCCTTTCATG CCTTAAATGG GAACATAGTG ATAGACTCTG GAACCCCTCT CACGTACTTT CCTGTGAGCT ACTGCAACCT AGTAAGAAAG GCAGTGGAAC GTGTTGTGAC AGCGGATCGA GTAGCTGACC CGAGCCGCAA TGACATGCTT TGCTACTATT CAAACACCAT AGAGATCTTT CCGGTGATCA CAGTGCATTT TTCTGGCGGT GCGGATCTTG TCTTGGATAA GTACAATATG TATTTGGAAT TGAATAGAGG AGGAGTTTTC TGTCTGGCTA TTATATGTAA TAATCCAACA CAAGTAGCTA TCTTTGGGAA CAGAGCACAG AACAATTTCT TGGTGGGTTA TGATTCTTCT TCACTGCTGC AACTCGGATC ATCACCTTAT GCGGATACCG TCTTTGATAA CTCAATGTAT CTAATGAAAC TACAAGTCGG TACTCCTCCT TTCGAGATCG AAGCTGTCAT AGACACCGGA AGTGAGATCA CATGGACACA ATGTTTGCCT TGTGTTCACT GCTACAAACA AAACGCTCCC ATATTCGACC CTTCGAAATC CTCGACCTTC AAGGAGAAAA GATGCCATGA CCACTCTTGT CCTTACGAGG TTGATTACTT CGACAAAACC TACACCAAGG GAACCTTAGC GACCGACACA GTCACAATCC ATTCCACTTC AGGGGAACCC TTTGTGATGG CTGAAACTAT TATTGGTTGT GGCCGCAACA ACTCATGGTT TAGACCTAGT TTTGAGGGCT TTGTTGGTCT AAATTGGGGA CCTTTATCGC TCATCACTCA GATGGGCGGT GAGTACCCAG GTTTGATGTC TTACTGTTTT GCTGGTAACG GAACTAGTAA GATCAATTTT GGAACAAACG CTATTGTCGG AGGAGGTGGG GTTGTATCAA CCACTATGTT TGTCACGACG GCGAAACCAG GTTTCTATTA CCTAAACCTA GACGCGGTCA GCGTTGGGGA CACCCGCATT GAGACACTGG GGACACCGTT TCATGCCTTA AAAGGGAACA TAGTGATAGA CTCTGGAACC ACTCTCACGT ACTTTCCTGA GAGCTACTGC AACCTAGTGA GAGAGGCAGT GGAACATGTT GTGACAGCGG TTCCAGCAGC AGACCCGACC GGCAATGACC TGCTTTGCTA CTATTCAAAC ACCACCGAGA TCTTTCCGGT GATCACAATG CATTTTTCTG GCGGTGCGGA TCTTGTCTTG GATAAGTACA ATATGTTTAT GGAATCATAT AGCGGAGGAC TTTTTTGTCT GGCTATTATA TGTAATAACC CAACACAAGA AGCTATCTTT GGGAACAGAG CACAGAACAA TTTCTTGGTG GGTTATGATC CTTCTTCACT GCTGGTTTCT TTCAAGCCCA CCAATTGTTC TGCATTGTGG AATTGA 
Length2136
Protein Sequence
Protein Residue
Map Locationscaffold_4: 11621694.. 11625203
Download Sequence
A.thaliana
AGI-codeAT2G28010.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
40.7431 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
54.6992 Ahg316947 Pectin lyase-like superfamily protein
72.3948 Ahg323966
77.8139 Ahg335577 tryptophan aminotransferase related 1
90.2663 Ahg351609 Protein of Unknown Function (DUF239)
91.1263 Ahg484096 RING/FYVE/PHD zinc finger superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression