Detail


ID : Ahg903697

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|903697|Al_scaffold_0003_825
Sequence
ATGGCGCGAC AGATGACGTC ATCTCAGTTT CATAAATCAA AGACTCTCGA CAACAAATAT ATGCTTGGAG ATGAAATTGG TAAAGGAGCT TATGCTCGGG TTTATATAGG ATTAGACCTG GAGAATTGTG ACTTTGTTGC CATTAAACAA GTCTCTTTGG AAAATATTGG TCAAGAGGAT CTTAACACCA TCATGCAAGA AATCGATCTC CTAAAGAACT TGAACCATAA AAACATTGTC AAGTATCTTG GATCGTTGAA GACAAAGACT CACCTTCACA TTATTCTGGA GTATGTTGAG AATGGCTCTC TTGCAAACAT TATTAAACCA AATAAATTTG GACCTTTCCC TGAGTCGTTG GTGACTGTTT ACATTGCACA GGTCTTGGAA GGTTTAGTAT ATCTGCATGA GCAGGGTGTC ATACATCGTG ATATCAAGGG TGCAAATATT TTGACAACCA AGGAGGGCCT TGTTAAGCTT GCTGATTTTG GAGTTGCCAC AAAACTCAAC GAGGCTGATT TCAACACTCA CTCAGTGGTC GGAACTCCTT ACTGGATGGC TCCGGAGGTT ATTGAATTGT CAGGAGTTTG TGCTGCTTCT GACATTTGGA GTGTTGGGTG CACTATTATT GAACTTTTGA CGTGTGTACC TCCTTACTAT GATCTGCAAC CCATGCCAGC CCTCTATCGC ATTGTTCAGG ATGATACCCC TCCCATTCCT GATAGTCTAT CTCCCGATCT TACAGACTTC CTACGACTGT GCTTCAAGAA GGATTCCAGG CAGAGGCCTG ATGCAAAGAC ACTTCTCTCA CACCCTTGGA TACGTAACTC AAAACAAGCA TTGCGGTCAT CACTTCGGCA TAGTGGAACC ATCAGATATA TGAAGGAACC CGATTCAAGT TCAGAGAAGG ATGATGAAGG TAGTCAAGAA GTAGCTGAAA GCTTTTCAGC AGAAAAAGTG GAGGTGACAA AAACTAACTC GAAAAGCAAA TTGCCTGTTA TAGGTGTGGC GAGTTATAGG TCTGAGAAAG ATCAGTCTTC ACCCAGTGAT CTTGGTGAAG AAGGAACGGA TGCAGAAGAT TATCTTAATT CAGTTCAAGG TCCTACATTG TCTACGCACG ATCAGTCTTC TCGTCAATCC GGTACTTGCA GTATTTCTTC GGATGCAAAG GGGACATCTC AAGATGTATT AGAGAACCAT GAGACATCTG AACGTGATGA AATACCTGGA AATCTTGAAA AGGAAGCTTC TGAAGGTAGA AGGAATACTT TAGCAACAAA GCTGGTTGGA AAAGAATATT CTGTCCAGGT GGCGCAGTCA TCACATAGTT TTAGCCAAAA AGGTGAAGTT GGGCTTCGAA AGGCTGTGAA GACTCCATCT AGTTTTGGTG GGAATGAACT GACCAGATTC AGTGATCCTC CTGGGGATGC TTCTTTGCAT GATTTGTTTC ATCCATTGGA TAAAGTTCCT GAGGGAAAAC CAAATGAAGC CTCAACATCG ACGCCTACTA CAAATGTAAA TCAGGGTGAT TCTCCTGCTG CAGATGGTGG AAAGAATGAT CTGGCAACGA AATTGAGGGC TAGAATTGCT CAGAAGCAAA TGGAGGGTGA AACGGGGCAC TCACAAGATG GTGGTGATCT TTTCCGCTTA ATGATGGGTG TTTTGAAAGA TGATGTTCTT AACATCGATG ACTTGGTATT TGATGAAAAA GTGCCCCCGG AGAATCTTTT CCCTCTGCAG GCAGTCGAGT TCAGCAGATT GGTGAGCTCC TTAAGGCCAG ATGAATCAGA AGATGCAATA GTAACTTCTT CTTTGAAACT TGTTGCCATG TTTCGTCAGA GACGTGGGCA GAAAGCAGTA TTTGTGACAC AGCATGGTTT CCTCCCTCTA ATGGATCTAC TTGATATTCC TAAATCTCGA GTAATATGTG CCGTGCTGCA GCTGATAAAC GAAATTGTAA AAGATAATAC CGACTTCCTG GAAAATGCTT GTCTCGTTGG TCTTATTCCT TTGGTAATGA GTTTTGCTGG TTTTGAGAGG GATCGATCTC GAGAAATTCG TAAGGAAGCA GCCTACTTCT TGCAGCAGAT TTGTCAGTCA AGCCCCTTGA CGTTGCAAAT GTTCATAGCT TGCCGTGGAA TACCCGTTTT GGTGGGATTT CTTGAAGCAG ATTATGCCAA ACACAGGGAG ATGGTTCACT TGGCTATTGA TGGGATGTGG CAGGTATTTA AACTCAAAAG ATCCACCTCT AGAAATGATT TCTGCCGTAT TGCTGCAAAG AATGGAATTC TTCTTAGGCT AGTCAACACT CTTTATAGCT TGAGTGAGGC AACTCGACTG GCTTCTATAT CAGGGGACGC ATTGATTTTG GATAGTCAAA CTCCACGAGC ACGCTCTGGT CAACTTGACC CTAACAATCC TATCTTTAGT CAGCGTGAGA CTTCACCTAG TGTGATTGAT CATCCTGATG GGTTGAAAAC TAGGAATGGG GGTGGTGAAG AGCCTTCTCA TGCTTTAATT TCAAATTCTC AAAGATCAGA TGTCCATCAA CCCGATGCCT TGCACCCAGA TGGTGATAGG CCTAGATTAA GCAGTGTTGC AGCAGATGCC GCAGAAGATG TTATACAACA ACATAGGATA TCTCTTTCTG CCAATATAAC ATCAACAGAT AAGCTTCAGA AACTGGCGGA GGGTGCGTCT AATGGTTTTC CTGTTACTCA GCCAGATCAA GTTCGACCTT TGCTTAGCTT ATTGGAGAAA GAGCCCCCTT CAAGAAAATT TTCTGGTCAA CTGGATTATG TGAAGCATAT CACTGGCATA GAGAGACATG AAAGTAGACT TCCTCTTTTG TATGCATCAG ACGAAAAGAA AACCAGTGGA GACCTAGAAT TTATAATGGC CGAATTAGCA GGAGTCTCTG GACGTGGAAA GGAAAACGGA AATCTCGATA CTGCACCTAG ATATTCCAGT AAGACGATGA CTAAGAAGGC TATGGCTATT GAAAGAGTCG CTTCTGCGTG TGGGATTGCA TCTCAGACAG TATCTAGTGT TCTGTCAGGT TCAGGTGTTT TAAATGCTAG AGCTGGAAGT ACTACATCAT CTGGTTTACT TGCCCATGCG CTGAGTGCAG ATGTCTCAAT GGATTACTTG GAGAAAGTGG CTGATCTGCT TCTCGAATTT GCCCGAGCTG AAACGACAGT AAAATCATAC ATGTGCAGCC AGAGCTTACT CAGTCGTCTT TTCCAGATGT TCAACCGTGT GGAACCTCCT ATTCTGTTAA AGATACTGGA ATGCACCAAT CATTTATCCA CGGATCCAAA TTGCTTGGAA AATCTTCAGC GTGCAGATGC AATTAAGCAA TTGATCCCCA ACCTTGAACT TAAGGAAGGG CATCTTGTTT ATCAGATCCA TCATGAGGTA CTTAGTGCAC TATTCAACCT CTGCAAGATA AACAAGAGGA GGCAGGAACA AGCGGCTGAA AATGGAATCA TTCCGCACCT GATGCTTTTC GTCATGTCGG ATTCTCCTCT GAAACAATAT GCATTGCCAC TACTATGTGA TATGGCTCAT GCATCTCGGA ATTCAAGAGA GCAGTTAAGG GCCCACGGCG GTCTGGATGT TTACCTAAGT TTACTCGATG ATGAATATTG GTCCGTGATA GCCTTGGATT CAATTGCTGT TTGCTTGGCG CAAGACATTG ACCACAAGGT TGAGCAGGCA TTTCTCAAGA AAGATGCAAT TCAGAAATTA GTTAACTTCT TCCAGAACTG TCCAGAAAGA CATTTTGTGC ACATTTTGGA GCCATTCTTG AAGATCATCA CGAAATCATC TTCAATTAAT AAGACATTAG CATTAAATGG ATTGACTCCG CTACTTATTT CAAGACTAGA CCACCAAGAT GCGATTGCTC GACTTAACCT CCTGAAACTC ATTAAGGCTG TTTACGAGAA GCATCCAAAG CCAAAACAGC TGATCGTAGA GAACAATCTT CCTCAGAAAC TGCAGAATCT GATTGAAGAA CGACGTGGTG GACAACGTTC AGGAGGCCAA GTTCTGGTGA AGCAAATGGC AACATCTCTC CTCAAAGCAC TTCACATCAA CACCGTCTTG TGA
Length4113
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3129442.. 3136910
Download Sequence
A.thaliana
AGI-codeAT3G07980.1
Descriptionmitogen-activated protein kinase kinase kinase 6
TAIR curator summaryMAP3K epsilon protein kinase 2 is functionally redundant with MAP3Ke1. Required for pollen development but not essential.
Alias[MAP3KE2][MAPKKK6][MAP3K EPSILON PROTEIN KINASE 2][mitogen-activated protein kinase kinase kinase 6]
Gene coexpression
MR
MR Locus Description
6 Ahg479235 transcription regulatory protein SNF5, putative (BSH)
9.94987 Ahg495825 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
12.2882 Ahg337630 evolutionarily conserved C-terminal region 4
12.6095 Ahg473277 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
15.6844 Ahg485847 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein
16.9706 Ahg494187 D6 protein kinase like 2
20.7364 Ahg480195 ARM repeat superfamily protein
22.4944 Ahg477867
25.7876 Ahg478976 Plasma-membrane choline transporter family protein
26.5518 Ahg471625 alfin-like 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression