Detail



ID : Ahg903839

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|903839|Al_scaffold_0003_967
Sequence
ATGGCTACTT CCTCTTGCGT TTGGGTGTTC GATGTCTTCC CGAGTTTTAG CGGAGAAGAT GTCCGAAGAA CATTCCTCAG TCACCTTCTC TTGGCATTGG ATCGCAAATT AATCACTTGT TTCAAAGACA GTGAGATCCA GAGAAGCCAG TCGATAGGCC TGGAGCTTGT ACATGCGATT AGGGGTTCAA GGATCGCGAT CGTCGTCTTC TCGAAAATAT ACGCCTCTTC AAGCTGGTGT TTGAACGAAT TGCTGGAGAT CGTGAAATGC AAGGAAGAGA AAGGTCAAAT GGTGATACCA ATCTTCTACG CTTTAGACCC TTCTCATGTC AGGAAACAGA CTGGCGACTT TGGAAAGGCG TTTGAAATGA TTTGCGAGAG CAAAACAGAT GAGTTGCAAA TTCAGTGGAG AAGGGCTTTG ACGGATGTAG CTAATATCCA TGGATATCAT TCTGAGAACT GGTATAACGA AGCACACCTG ATTGAAGAAA TCGCCAATGA TGTTTTGGGT AAACTTAATA ATGTAACACC GTCAATGGAG TTTCTTGACT TTGTTGGAAT CGAAGATCAT CTGGCCAAGA TGAGTCTGTT GTTGTGCTTG GAATCCGAGC AAGTGAGGAT GGTTGGGTTA TGGGGTCCTT CAGGAATTGG AAAGACTACC ATTGCAAGAG CTCTTTTTAT TAGAATCTCT CGTCACTTCC AAAGCAGCGT TTTCATAGAC AGGGCTTTTG TATCTAAGAC TATGGAAATT TTTAGGGGAG CCAATCCTGA CGACTACAAC ATGAAGCTCC ATTTGCAAGA AAATTTCCTC TCTGAGATTT TAAATAAAAA GGATATAAAG GTACATCATT TAGGCGCGGT GGGAGAGAGG CTTAAGCACA AGAAAGTTCT TATAGTACTT GATGATTTGG ATGATCAAAT AGTGCTAGAT GCCTTGGTCG GTGGAACTCA ATGGTTTGGA TGTGGGAGCA GGATCCTTGT GATTACAAAA GATAAGCATC TTCTAAGAGC TCATGGGATT GATCGTATTT ATGAGGTCGG TCTCCCTTCT CATAAACTAG CTCTAGAGAT GTTTTGCCAA TATGCTTTCA GGCAAAACTC TCCACGTGAG GGGTTTGCAG AGCTTGCTTC TGAAGTCACA AAAGGTGCGG GTAATCTTCC TTTGGCTCTT AACGTTTTTG GGTTGTATTT GCGGGGGAGG GACATAGAGG ATTGGTTGGA TATGTTGCCT AGGCTTCGGA AAGGACCCTA CGGGAAAATT GAGAAAGCAC TTAGAGTTAG CTATGACGGG TTAGGTAGCA AAGAAGATAA AGCAATATTT TGTCACATTG CATGTCTTTT CAATGGTATG GAAGCCAATG ACATCAAGCT GTTACTTGCG GATAGTGACT TGGAAGTTAA TATCGGGCTT AAAAACTTAA TTGATAACTC CCTCATACAT GAAAGAGGGA GTACTGTACA TATACATTGT ATGGTACAAG AAATGGGTAA GGAAATCATC CGTACACAGT CCAACAAGCC CAGAGAACGG GAATTCCTGG TGGATTCTAA GGATATTGGC GATGTATTTA ATGATACCTC TGGTGCTAAG AAGGTTTTGG GTTTATCATT GAGTCTAGCA GAGTTTGATA AGTTGCACAT AGATAAAAGG GCCTTCAAAA GGATGCGTAA TCTACGTTTT CTTAGAATCT ATGAGGACTC ATTGGACTTG CATAACCAAG TCAGATTGCA CTTACCAGGA GGCCTCAGCT ATTTTCCCCC AAAGCTCAAG TTACTCTGTT GGGATGGATA TCCAATGCGA AGTTTGCCAG CTAGCTTTCG TGCTGAACAT CTTAATGTGC TCAGAATGCG GAACAGCAAG CTCGAGAAAC TATGGGAAGG AGTAGAGTCA TCTGCATACC CTGAGGATAG GGTGGAACTT CCTTCTTCTC TTCGGAATCT CAATGAATTA TATATGCAAA CTTGCTCAGA GCTAGTTGCT CTTTCTGCCG GCATCAACCT CGAATCTTTG TATCGGCTTG ATCTCGGTGG ATGCTCACGG TTTTGGGGTT TTCCTTATAT CTCAAAGAAC GTCTCATTTC TCATTCTAAA CCAAACAGCT ATTAAAGAAG TTCCTTGGTG GATCGAGAAC TTCTCTAGGC TCATATGCCT AGAAATGCGG GAATGCAAAA GATTAAGATA TATATCCCCC AAGATTTCCA AACTTAAACT TCTCGAGAAG GTTGACTTTT CAAATTGTGA GGCATTGACT TCTGCTAGCT GGCTTGACGG TCCAAGTGCT GTAGCAACGG GAGGAAACAA TATTTACACT AAGTTACCAG TGCTCAATTT CATCAACTGC TTCAAATTAG ATCAAGAAGC TCTCGTTCAA CAATCAGTTT TTAAGTACCT GATTTTACCA GGTAGAGAAG TCCCTTTATA TTTCACCAAC CGAGCTACCG GAAGCACTCT GGCTATCTGT CTACTTCAGA GATCTCTCTC TCAACAATTT TTCGGATTTA GGGTTTGCAT CGCGGTTGAT ACCCATGAAG CTAATTCCTT CACCCCTAGG TGGATATGTT GTCACGTCAC AAGAAAATAT GGGAGCTCCT TTGATTCCAC TGATTGTCAC CTTGCCATTG ATTTACCGCG TCAGATGGAT AACCATCTGG TTATCTTTGA CTGTTGTTTT CCTCTAAACA AAGACATTGA TGCTCTAGCT GAACTGAACT ACGATCGAGT AGATATAGAG ATTACTTTCA CTACTGACTC TCTTTGCAAA ATAAAAGGAT GTGGTGTACG ACTCTCTGAG ATTTGTTCAT ATTTGGATAA CGGACTTAGT AATGTTTGTG AAGCTGATGA AAGCAAACAC GGTGAAGAGT ATGGAGACAG TATTGCAGAA ATAAGGAGAA GTAGGAAGCG AGTGCGGATA ATGGAAAAGT CGATTTAA 
Length2928
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3607178.. 3610451
Download Sequence
A.thaliana
AGI-codeAT5G40060.1
DescriptionDisease resistance protein (NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
19.1311 Ahg471422 phloem protein 2-A12
23.5797 Ahg487338 Glycosyl hydrolase family 85
32.3728 Ahg474332 tRNAse Z3
40.3485 Ahg489839 methyl esterase 12
52.192 Ahg942000 pseudo-response regulator 5
55.4346 Ahg472480 UDP-Glycosyltransferase superfamily protein
55.5068 Ahg492924 Protein of unknown function (DUF1218)
73.1779 Ahg949730 pfkB-like carbohydrate kinase family protein
73.7292 Ahg354960 transferases, transferring acyl groups
84.0357 Ahg486604 Arabidopsis thaliana protein of unknown function (DUF821)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression