Detail


ID : Ahg904317

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|904317|Al_scaffold_0003_1445
Sequence
ATGGCGGGAT CTGCACCAGA AGGCACACAG TTTGATGCAC GTCAGTTTGA TCAGAAACTG AATGAAGTAC TTGAGGGACA AGATGAGTTC TTCACATCTT ATGATGAGGT TCATGAGAGC TTTGATGCCA TGGGTCTGCA AGAGAACCTT CTCAGGGGTA TTTATGCTTA TGGTTTTGAG AAGCCTTCTG CTATTCAGCA AAGAGGAATT GTCCCCTTTT GCAAAGGTCT TGATGTGATT CAACAGGCCC AGTCTGGTAC TGGGAAAACT GCGACTTTCT GCTCTGGTGT CTTGCAGCAG CTGGACTTCT CCCTTGTCCA GTGTCAGGCT TTGGTTCTAG CTCCAACTAG AGAGCTTGCT CAGCAAATTG AGAAGGTCAT GAGGGCCCTC GGTGATTACC TTGGTGTCAA GGTTCACGCC TGTGTTGGTG GAACCAGTGT CCGTGAGGAT CAGCGTATCC TCCAAGCTGG TGTCCATGTT GTTGTTGGAA CTCCAGGACG TGTCTTTGAC ATGTTGAAGA GGCAGTCTCT CCGTGCTGAC AACATCAAGA TGTTTGTTCT CGATGAAGCT GATGAAATGC TCTCCCGTGG TTTCAAGGAC CAGATCTATG ACATATTCCA GCTTCTACCA CCAAAGATCC AAGTTGGTGT GTTCTCCGCA ACAATGCCAC CAGAAGCTCT TGAGATCACA AGGAAGTTCA TGAGCAAGCC AGTGAGAATC TTGGTGAAGC GTGATGAGCT GACCCTTGAA GGTATCAAGC AGTTCTATGT CAACGTTGAG AAAGAAGAGT GGAAGCTCGA GACACTTTGT GATCTCTACG AGACTCTGGC CATCACTCAG AGTGTCATCT TCGTGAACAC CAGGCGTAAG GTTGATTGGC TCACAGACAA AATGAGAAGC CGTGACCACA CAGTCTCTGC AACTCACGGA GACATGGACC AGAACACCAG AGACATCATC ATGAGAGAGT TCAGGTCTGG TTCCTCCCGT GTTCTCATCA CCACTGACCT CTTGGCTCGT GGTATTGATG TTCAACAAGT CTCTCTGGTT ATCAACTTCG ATCTCCCAAC TCAGCCAGAG AACTACCTCC ACCGTATCGG AAGAAGTGGA AGGTTCGGGA GAAAGGGTGT GGCGATCAAT TTTGTGACCC GCGATGATGA CAGGATGCTG TTTGATATTC AGAAGTTCTA TAACGTGGTT GTCGAAGAGC TGCCTTCAAA CGTGGCCGAT CTGCTGTGA
Length1239
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5430818.. 5432320
Download Sequence
A.thaliana
AGI-codeAT3G13920.2
Descriptioneukaryotic translation initiation factor 4A1
TAIR curator summaryeukaryotic translation initiation factor 4A-1
Alias[EIF4A1][RH4][TIF4A1][eukaryotic translation initiation factor 4A1]
Gene coexpression
MR
MR Locus Description
8.30662 Ahg311847 GTP binding Elongation factor Tu family protein
8.544 Ahg496650 DNA polymerase V family
9.64365 Ahg487065 Ribosomal protein L4/L1 family
13.9642 Ahg490636 glycine-rich protein
14.2829 Ahg479524 T-complex protein 1 alpha subunit
15.8745 Ahg496255 evolutionarily conserved C-terminal region 3
16.4317 Ahg471639 valyl-tRNA synthetase / valine--tRNA ligase (VALRS)
19.6977 Ahg496177 GTP binding Elongation factor Tu family protein
19.975 Ahg474678 homolog of nucleolar protein NOP56
21.9317 Ahg480524 nucleosome assembly protein 1;2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression