Detail



ID : Ahg904884

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|904884|Al_scaffold_0003_2012
Sequence
ATGGCACAGA TGCAGCGAGA AGAAGTAGAG TCAGTCACGA CGGAGAAGAA AGGATTAGAC GGAGGTGGCG GATCTTCAGG CTCTCAGGCG ACGGCGTTCA AATTCAACGC TCAGGCGCCG GAATTTGTAC CACGATCACA TACCACCGCA CCAGCAACGC AGGTTTCTCC GGTATCCGGT TACTTTTATC CTTGTTTCCA TTACAACGGC GGTTGCATAG GAGGATGCGG CGGAGGAGTC TGCGGTGGTG GAGGAACCGG CGTTGGTACT CAATCGTCGG ACTGGATCTA CGTGGGAGGA GGAGATCCTA CTGCTCAGCA TCAACATGTT CATGATCCGG CTGCTGCGTT TTTCATTTCG AATCCGGCGG TTCAGTTTCC GGCTAACCAG AACTCGTCTT CTTCGTCGAA GAATCTGCTT TCCGATGATC TCCGTCTTAA GATCGTCAAA CAGGTTGAGT ACCAATTTAC TGACATGAGT CTCCTAGCCA ACGAGTCTAT TTCAAAGCAT ATAAGCAAAG ATCCTGAAGG TTATGTGCCC GTATCCTATA TCGCTTCGAC CAAGAAGATC AAGGCTTTAA CGAGTAACCA CCACCTAGTT TCACTTGCTC TACGCTCCTC TTCAAAGCTT GTTGTGAGTG AAGATGGTAA GAAAGTTAAG CGTACAAGTC CATTTACTGA TAGAGACAGA GAGGAATTGC AGGGCAGGAC TGTCGTTGCA GAGAATTTGC CAGATGATCA TTCTTACCAG AACCTTGAGA AGATCTTTGG AGTTGTTGGA AACGTCAAAG CGATTCGTAT CTGTCATCCT CCAGAATCCA ACTCCTCTCG TCCAAAAGGC GATTTCTTGA TGAGCAACAA AATTCACGCC CTTATCGAGT ATGACAACAC TGTTATCGCG GATAAAGCAG TGGAGAAGCT GAACGATGAA AGAAACTGGA GGAAAGGGCT TCGTGTGAGG CTGCTTCTTA GATGCTCACC CAAATCGGTG CTCAAGAACC GAAGAAACTT CGATGGAATT CTCATCGATG ATGAACTTCC TTCTTATGAA TCTGGAGAAG ACTCTCCGCG TCTCCATTTA ACCGAATCAC AGCTTGATAA CGACGGTGAT GACAACAATG TTGGTGGACT GTGGGGTAAA GGGAGAGGAA AAGGACGAGA ACGATCCCCA AGAAGCTACG CTGTAGGAGG AGGAGGGCGT AGCTTCGGGA TTGGGCTCGG AGTCAGCCTC GGGATACCGA GCCTGGGCTC ACACGAATCT TCGTCTCCTA AAACAGCAAC AAAGGGACCA AGAATGCCTG ATGGAACCAG AGGCTTCACC ATGGGACGTG GCAAACCTTC CATCTCACTC TCACCTAACA ATCTCTAA 
Length1368
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7753067.. 7759085
Download Sequence
A.thaliana
AGI-codeAT3G19090.1
DescriptionRNA-binding protein
TAIR curator summary
Alias[AtLARP6c][LARP6c][La related protein 6c]
Gene coexpression
MR
MR Locus Description
2 Ahg947612
3 Ahg921700 ENTH/VHS/GAT family protein
3.31662 Ahg351013 Eukaryotic aspartyl protease family protein
3.4641 Ahg922313 MAP kinase kinase 10
4.58258 Ahg925744
4.89898 Ahg359114 transposable element gene
5 Ahg942510 transposable element gene
5.74456 Ahg487573 Pectin lyase-like superfamily protein
5.91608 Ahg907632
7.48331 Ahg936672 Protein of unknown function (DUF1216)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression