Detail



ID : Ahg905515

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|905515|Al_scaffold_0003_2643
Sequence
ATGACAAAGA TTGAAGGAAT TGTTTTTGGA AACGGTGATC TTACGTCCTC AAGTAAATCT TCGTCGAGTT TATCAGCGAT TTTGATTGAA GTGAAGACAG TGGTGGCGAC AAGAGTAGCA GGAATTTGCG AACGTGAGCA AGTAGCTGCT CGTACTAAGC CTTACTCGGC TGAGCTCCGA GATCACTTGT CGCCAATCGC CGTCGTTACT CAGAACAGAG CCATTGTTCT CCACCTTAAG CTGATGGTTC AAAGCCACCC TACTGGCTTA TCCAAAAATA ATCTCTTGAA GCTCTTTGAG CCACGGCCGC CATTGGAGTA CAAACCACCA TCGGAGAAGA GAAAATGCCC ACATTGTATG GCTCAGCTTG TGAGTAACTT TGCTGAGCCT GGGGATGCAC CTTAG 
Length405
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10772932.. 10774358
Download Sequence
A.thaliana
AGI-codeAT4G31560.1
Descriptionhigh chlorophyll fluorescence 153
TAIR curator summaryEncodes HCF153, a 15-KDa protein involved in the biogenesis of the cytochrome b(6)f complex. Associated with the thylakoid membrane.
Alias[HCF153][high chlorophyll fluorescence 153]
Gene coexpression
MR
MR Locus Description
14 Ahg924708
14.2829 Ahg942890
18.3848 Virus2033
18.9737 Ahg923216
29.7993 Ahg895600 Ubiquitin-like superfamily protein
34.4964 Virus1214
37.55 Ahg932658
39 Ahg312367 Defensin-like (DEFL) family protein
40.9878 Ahg916376 FBD, F-box and Leucine Rich Repeat domains containing protein
46.6476 Ahg931452
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression