Detail


ID : Ahg906278

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|906278|Al_scaffold_0003_3406
Sequence
ATGACCCAAC GGTTGGAAGC GCAAGGGACT AACGATCGCA ATTATGAGTG GGATGATGGA TCGGACCATG ATGATGTAAC AAAGATATCT GTGAGAGGTG ACATTAATGG CATACAATAC ATCCGATTCG ACTATATCAA GAGTGGACAA ATAAAATATG GATCATTTCA TGGTTGGACG AGTCCAGGTC TCTCACAAAC GTTTGAGATT AACAAACTAA AAGACGAACA ACTTGAATCC GTTGAGGGTT ACTACGAACC CAACTCGGGT GTGATTCAAG GAATTCAATT CAAAACCAAC TTGAGGGTTT CTGAACTAAT AGGATACGAA GAAAATGGTA CTAAGTTTTC ACTAGCTGTG GATGGAAAGA AGATCATTGG GTTTCATGGA TCAAGTTCAT CAAAGCTCAA ATCTCTTGGA GCATATTTCA CTAGGATTTC TCCAACTAGA TTGGAAGTGA AAGGGATAAA AGGAGGCAAG GAGTGGAACG ATGGATCCGA TCATGAAGGT GTTACAAAAA TCCATGTACG AGGTGGTCCT GAAGGTATAC AATACGTCAA GTTTGATTAT ATTACGGATG GCAAACATAT ATATGGGCAA GCTCATGGTG CCACAGGTAG AGGTTTCACG CAACCGTTTG AGATCGACCA TTTCAACAAG GAATATTTGG TATCTGTTGA GGGTTACTAT GACAACGACA AACATGGGGT CATTCAAGGG CTTCAATTCA GAACTAACAA CAAGACTTCA GAATTGATGG GATACGACAA TGGTAAGAAG TTTACACTAG CAGCTAGTGG AAAGAAGATA ATTGGGTTTC ATGGATTTGC TGAGAAGAAT CTAAACGCTC TGGGAGCATA TTTCACAACT TTTCCTTTTA CTAAATTAGA ACTCAAAGGT GGTACTACTC TAGGAAAAAT TTGGGATGAT GGTGCTTTTG AGGGCGTAAG AAAGGTGTCC GTTCATTCTA AAAACTCTTA TGTAAATTGC GTCACATTCC ATTATGAAAA CAATGGCAAA GTGGAAAAGC GTGAGCATGG GTCGATGGCT GGAAAAGAAG AAGAGTTTGC GGTCGACTTT CCAAATGAAT TTATCACATC CGTGGAAGGG ACTCTGGAAA CCGATGGTTA TACGTGGATT GCGTCCTTGA CTTTCAAAAC ATCTAGAGGG AGAACTTCTC CACCATTTGG AAGTATGACT AAAACTAAAT TCGTACTTGA GAAGAAAGGT TGCGCTGTGG TTGGGTTCCA TGGACGGTCT ACTGGTTGTA TTTTGGCTCT TGGAGCATAT TTTTATCCGC TGCCTCCTCC GGTTGGTGTG GAGAAACTAG AAGCAAAAGG TAGTGATAGA GGAGACTCTT GGGACGATGG AAGTTTTGAT AGTATTAGAA ACATATACAT GGGACACAAC GAGATGGGTG TTGCATTTGT CAAGTTTCTG TACGACAAAG ACAGCCAGAC AGTGATCGGA GATGATCATG GGAACAAGAC ATTACTTGGA GTTGATGAGT TTGAGTTGGA GTATCCGAAA GAATACCTGA TATCAGTTGA GGGTAGTTGT GATGTTTTAG ACGGAAGTGA ATATGAAGTT ATACGCATGC TTAGTTTCAA GACCAATATG CGAACCTCTA AAATTTTTGG ACTCGAGACA ACCTCAAGCT TCATACTCCA GAAGGAATGT CATAAGATCG TTGGGTTCCA TGGAAAAGTA AGTAACATGC TTCATCAAAT TGGTGTCCAT GTCCTACCTA TTACTGACTG A
Length1761
Protein Sequence
Protein Residue
Map Locationscaffold_3: 18836636.. 18838770
Download Sequence
A.thaliana
AGI-codeAT1G60130.1
DescriptionMannose-binding lectin superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8 Ahg930168 Domain of unknown function (DUF26)
9.05539 Ahg946652
15.2971 Ahg919336 CLAVATA3/ESR-RELATED 3
18 Ahg337341
18.9737 Ahg931796 Maternally expressed gene (MEG) family protein
19.799 Ahg329038 WRKY DNA-binding protein 34
21.6333 Virus3751
22.1811 Ahg477677 RmlC-like cupins superfamily protein
37.55 Ahg949056
37.9868 Ahg946045 Uncharacterised protein family (UPF0172)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression