Detail



ID : Ahg906932

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|906932|Al_scaffold_0002_13
Sequence
ATGAATGTGT TGTTATTTAG TTTTGTTCAT TTGGATGATT TCAGGCTATT GAGATTTGAA GAAGCATACA ATGATGAACA ATCAGTCGCC CTAGTTGATG ATATGATTCT ACAGGCTCAT ATCTTAGGCC AAGGGTACGC TTTTACTCTT CACTCAAATA TATATTATCT GTCTCTGTGT TTGTGTTTAT GTATATACTT TTCTTTTGAT GAATTTAGAA TTGTGGGCGA AGTAGCTTCG ACCGGTAACC ATCAATGGCT GTTCTCAGAC ACATTGTTTC AGAAGAATAA AGATTTGATA TTTATGTGTT TGATTGTTTT GCAGTGGGAC CATGAGTTTC AGAATCAGTT TCTCTCTGGC TTTAAGATTC TTATTCGGCA GTTTCCTTAT ACACAGACTA TAGCAATCCT TCCACTAGGA TCCAGCGGCG TTGTTCAGCT AGGATCTACT CAAAAGATTC TTGAGAGCAC AGAGATATTG GAACAAACAA CAAGAGCTCT GCAGGAGACG TGTTTCAAAC CAGATGATTC GGGGGATCTC GATACTCTGT TCGAGTCTTT AGTCCCACTG GGAGATTACG AGATTTTCCC AGCTGAATCT TTCCAAGGAT TCAGCTTTGA CGACATCTTC GCTGACGACA ATCCTCCTTC TTTGCTCAGC CCTGAGATGA TCTCTGTTGA AACCTCTGAA GCAGCTTCTT CCCACCAAGA TATTAGCAAT GGAGATGATT TTGGGTTCGA CATTCTCGAG TCTTACTCTC TGGACGATCT TTACCAGCTG CTCGCTGATT CACCAGAACA GAACTGCTCT TCCATGGTGA TCCAAGGAGA TGACAAGGAT CTTTTCGACA TTTTGGGGAT GAATCCTCAA ACGCCTACAA TGGCTTTGCC GCCTAAAGGA CTCTTCTCAG AGCTCATAAG CAGCAGTCTT AGCAACAACA CTTGTAGTAG TTCTCTCACA AACGTGCAAG ACTATTCTGG CGTGAACCAG AGCAAAAGAC GGAAGCTTGA AACATCATCA GAGCATAGCT CAAGCTTGTT TCCGCAGGAG GAGACAGTAA ATGGTCGGAG TTTGTGGAAT GATGATGAGA GATCGAGCGT TGGAGGGAAT TGGAAGAAGC CTCACGAAGA AGGTGTGAAG AAGAAAAGAG CAAAGGCAGG AGAGAGCAGG AGGCCGAGGC CTAAGGACCG TCAGATGATA CAAGACCGTA TCAAGGAGCT GCGAGGCATG ATTCCAAATG GAGCTAAGTG TAGCATAGAT ACGTTGCTTG ATCTGACCAT AAAACACATG GTGTTCATGC AAAGCATCGC CAAGTACGCG GACAGACTCA AAGAACCATA CGAGCCTAAG CTGGTGAAGG AGAAAGAGAG AACGTGGGCG TTGGAAGTGG GGGAAGAAGG AGTGGTATGT CCGATAATGG TGGAGGAATT GAACAGGAAA GGAGAAATGC AGATAGAGAT GGTGTGTGAG GAAAGAGATG AGTTTCTGGA GATAGGAGAC GTGGTGAGAG GATTGGGGTT GAAGATAGTG AAAGGAGTGA TGGAAAGAAG AAAAGGGCAA ACATGGGCAC AGTTCATCGT AGAGGCAAAG CCACAAGTGA CAAGGATTCA AGTATTGTAC TCACTTACGA CGCAGAAGCA GCTCAGCACC GTCATCGTCT GGGGGATGGC CGCCACACTC CTCTGTTCCC GATGTGGGTT CCGATCGGCG ATATCGACTC CTACTGCTTC GCCCGTGAGG CCTTCTCCGA TCCAATCGCC TTCCACCTCC TCCTCACCCT GTAACCCCCT CAACCAACCA TCCCTCCTTT TGTTTTTCTC ATCTCTTGTT GTTGTTAAAA TCAGATATAA GGCATTTGAT GAAGTCGAAG GTATTGAAGT TGCTTGGAAC CTCATGAGCA TCGAACATGT CTTGCAGATG CCTGCCCAAC TTGATAGGCT ATATTCCGAA GTCCATCTCC TCAATTCCCT TAAACATGAT AACATCATCA AACTCTTCTA CTCTTGGGTT GATGATCATA ACAAGTCCAT CAACATGATC ACTGAGCTTT TCACCTCTGG CCTCCACTTT TTGCATTCTC AGACCCCTCC TGTAATTCAC CGGGACCTTA AGTGTGACAA TATTTTTGTC AACGGAAATA CCGGAGAGGT CAAAATCGGA GATCTTGGCC TTGCAGCTGT TATGCAACAA CCCACTGCTC GAAGTGTGAT AGGTACTCCT GAATTCATGG CACCTGAGCT CTATGAAGAA GAATATAATC AACTTGTGGA CATCTATTCT TTTGGCATGT GCATGTTGGA GATGGTAACA TGTGAATATC CATATAGCGA ATGCAGAAAC CAGGCTCAAA TATACAAGAA GGTTACCTCG GGTATAAAAC CTCAATCTCT CAGCAAAGTT GATGATCCTC AAGTTAAGCA ATTCATAGAG AAGTGTCTTC TCCCAGCTCC TTCTAGACCA ACTGCTCTAG ATCTCCTGAA GGACCAACTC CTTGCAGTAG ATGGCGCCAA GGACTCCACT CTTGCTGCTT CATTAAACAC AACATTCAAA CCTGCAAAGC AACCACACTC TGAATATCGT CGTATGGATG TTGATCATAA GGAGAATACA AGTGTTTCCA TCTGCTCCTC TGCCAAAAGC AGCCAAGAAT GTGCATGGCT CCAAACCATT GAAGTCCAGA GGGTTGCTGA AAATACCGAA TTCAGGTTGA GTGCAGAGAG GAGAGATGAT GTGGCAGCAT CAATGGCTCT GCGTATCGCG GGCTCATCTG GTCAAGCAAG AAAAGTTGAT TTTGATTTCA ATCTGAAGAC AGACACAGCA AGAGCAGTTA TAGGGGAGAT GGTTGAAGAG CTTGATCTGT CAAGTGAAGA GGTTATTGTG ATAGCTGAGA TGATAGATGA ACTGATAATG AAGCTGAAGG CTAATCGAAG CCTGCCTTAT GATGCAAACA GTTTATATCA GTCGAAGGAT GAAGAAGCTG GAGAATCAAT GAAGTCAGAC ATATCAGCAG ACTACTACCA TCGGGTCTCC TCAAACGAGG GTTCAGGGCT CGGCTGCTGC TGCGAGGCAG TAGAGTCATT GTTGTCCTCG TTTCTGGATT CGTGCTCAAT GGTGTCAAAC AAGCAGTCGG AGGATCTGAA GGCGGAGCTG AATGTGATAG AGTCGCAATA TAACCAATCT TGTCAACGAC TGCTGAAGCT GAAAGAGGAA GCTATAGAGA ATGCTAAACG GAAGTGGATG AAGCTGAGTT GA 
Length3252
Protein Sequence
Protein Residue
Map Locationscaffold_2: 69209.. 74122
Download Sequence
A.thaliana
AGI-codeAT1G64625.1
DescriptionSerine/threonine-protein kinase WNK (With No Lysine)-related
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.1245 Ahg488610 LUC7 related protein
22.0907 Ahg946015 proline-rich spliceosome-associated (PSP) family protein
31.3688 Ahg480436 Phox-associated domain;Phox-like;Sorting nexin, C-terminal
36.1663 Ahg497286 EamA-like transporter family protein
40.6325 Ahg912571 Protein of unknown function (DUF3506)
42.8952 Ahg474178 Membrane trafficking VPS53 family protein
43.4511 Ahg323893 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
49.7092 Ahg471912 Family of unknown function (DUF572)
56.285 Ahg484298 Small nuclear ribonucleoprotein family protein
58.4808 Ahg489175
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression