Detail



ID : Ahg907902

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|907902|Al_scaffold_0002_983
Sequence
ATGGAATTAT ACTACTTGGT ACTTGCCTTG ACAACACCGG GTACTTGTTT TTTCAAGGCG AGTACGAGCC GAGCCTACGA AATTGCCATT GAAATGGCTC TCAAAGCTTC ACCAGCTGCC GGATTATTCC CTCCTCTCCG TCCTACTGCT TCTTCTTCCC CTTCGACTTC TAATCGCCCT TATTCCCTCA GGGTTCTCCC CCTCAGACCA TCCTTCTTCG GTAACTCCAG TGGGGCTCTG AGAGTGAATG TGCTGAGATT AGCTTGTGCT AATAGACTCA GGTGCAATGG TCACGGTGCT ACGATGAATC TTTTTGAACG GTTTTCTAGA GTGGTCAAGT CATATGCAAA TGCGTTCATA AGCTCCTTCG AAGACCCGGA GAAAATCTTG GAGCAAACTG TCATTGAAAA GAATAGTGAT TTGACAAAGA TGCGTCAAGC CACTGCACAG GTACAGCCCT TAAACGACGA AAGTCTTTTG CTGTAG 
Length486
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8375778.. 8377263
Download Sequence
A.thaliana
AGI-codeAT1G65260.1
Descriptionplastid transcriptionally active 4
TAIR curator summaryEncodes a protein required for thylakoid membrane formation.
Alias[PTAC4][VIPP1][plastid transcriptionally active 4][VESICLE-INDUCING PROTEIN IN PLASTIDS 1]
Gene coexpression
MR
MR Locus Description
18.2209 Ahg330886 zinc transporter 8 precursor
24.2074 Ahg934565
24.3926 Ahg912951 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
34.5688 Ahg908046
36.9865 Ahg942528
38.7298 Ahg484466 Plant self-incompatibility protein S1 family
46.3141 Ahg926326
48.2597 Ahg932851
51.5364 Ahg331944 alpha carbonic anhydrase 8
65.7267 Ahg939079
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression