Detail



ID : Ahg908062

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|908062|Al_scaffold_0002_1143
Sequence
ATGGTGGCCT ATTCTCTTAA GAGCGTGGGA ACCTATGTGT GGACATGCAA AACCTATGAT GGTGATGTCC AAAATGATTT CTTGGCACAA GGGAAGAACT TTAATAACAA TTTGAGGGCT AGGTTAGATG ACAACACAAA ACTTTTGGAG TTCACCGAAA AGCTTGAAGC CGCTTGTGTT GGGACAGTGG AGTCAGGGAA AATGACCAAA GATATTGCAC TCATCATTCA CGGCTCATGG CTTTCACACT TCATGAACAC AGAGAATTTC ATCGATGTAG TCGTTGATGA GCTCAAAGCA AGACTAGCAT CAAAGCTTAA GAAACTGAAG AAATTTGGTA AAAATTTGAA CGTCTCAGTT CCTCAGTCTT TTATCTGTTA G 
Length381
Protein Sequence
Protein Residue
Map Locationscaffold_2: 9804135.. 9809470
Download Sequence
A.thaliana
AGI-codeAT1G65930.1
Descriptioncytosolic NADP+-dependent isocitrate dehydrogenase
TAIR curator summaryEncodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses.
Alias[cICDH][cytosolic NADP+-dependent isocitrate dehydrogenase]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg932865 RING/U-box superfamily protein
4 Ahg942962
4.24264 Ahg333050
5.65685 Ahg951819
6.32456 Ahg927861
6.9282 Ahg908604
8 Ahg907546 UBX domain-containing protein
9.16515 Ahg339268
9.48683 Ahg327171
9.48683 Ahg944298
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression