Detail



ID : Ahg910348

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|910348|Al_scaffold_0001_602
Sequence
ATGGAGACGA AGAAGATTGC TTCATTTGAT CGTGCCAGTG AGCTTAAAGC TTTTGATGAG AGCAAGACTG GTGTGAAAGG ACTCGTTGAC GCTGGAATCT CACAGATTCC ACGCATTTTT CATCACTCAT CTGTCGAACT AGCAGACCCT AAACCACTTC CCTCGGAGTT GCTACATCTA AAGACGATCC CAACGATCAA TCTCGGAGGA CGGGTCTTCG AGGACGCGAT TAAGCACAAG AACGCGATTG AAGGGATTAG AGAAGCGGCT GCGAAGTGGG GTTTCTTCCA AGTGATTAAC CATGGAGTTT CGCTCGATCT TCTTGAGAAG ATGAAAGATG GAGTTCGTGA CTTTCATGAG CAACCCCCTG AAGTGAGGAA AGAATTGTAT AGCCGCGATT TCAACAGAAA GTTTATGTAT TTAAGTAACT TCGATCTCTA CAGTGCTCCA GCTGCAAATT GGAGAGACAC ATTCTATTGT TACATGGCTC CAGATCCTCC AAAACCAGAG GATCTGCCAG AGATTTGTAG GGATGTTATG ATGGAATACT CAAAGCAAGT GATGATTTTG GGTGAATTTC TCTTTGAGCT TTTGTCAGAA GCTCTAGGGC TGAACCCTAA TCACCTCAAG GACATGGATT GCCTAAAGGG TTTGCGCATG CTTTGCCATT ACTTCCCACC GTGTCCAGAG CCTGACCTAA CTTTTGGCAC AAGTCAGCAC TCCGACAGCT CTTTTCTTAC CATCCTCCTT CCAGATCAGA TCGAAGGGCT TCAGGTTCTT CGTGAAGGGT ACTGGTTCGA TGTTCCTCAT GTTCCAGGCG CTCTCATCAT CAACATCGGA GATCTTTTAC AGCTTATAAC AAACGACAAA TTCATCAGTT TGGGGCATCG AGTATTGGCG AACAGAGCCA CAAGAGCTCG AGTCTCTGTC GCATGTTTCT TCACCACCCA CGTAAAACCC AATCCTAGAG TATATGGACC CATTAAAGAG CTTGTGTCTG AAGAAAACCC TCCAAAGTAC AGAGAGACCA CCATTACAAA TTACGCTACT TACTTCAATG GCAAAGGACT TGGCGGAACC TCTGCTTTGC TCCATTTTAA AGTATGA 
Length1107
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2255560.. 2260993
Download Sequence
A.thaliana
AGI-codeAT1G06640.1
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR curator summaryencodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase
Alias
Gene coexpression
MR
MR Locus Description
20.5426 Ahg492857 VACUOLAR SORTING RECEPTOR 7
31.1288 Ahg327678 cyclic nucleotide-gated channel 13
35.5809 Ahg475116 WRKY family transcription factor
45.4313 Ahg935611 cyclic nucleotide gated channel 3
51.8073 Ahg475181 S-locus lectin protein kinase family protein
52.6498 Ahg911216 GDA1/CD39 nucleoside phosphatase family protein
54.2218 Ahg322779 Protein of unknown function (DUF707)
55.8391 Ahg472789 BSD domain-containing protein
60.663 Ahg926838 Pentatricopeptide repeat (PPR) superfamily protein
62.9285 Ahg913087 PLATZ transcription factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression