Detail



ID : Ahg912174

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|912174|Al_scaffold_0001_2428
Sequence
ATGGTTGGAG GAAGTAGTGC ACAGAAGCTA ACTACAAATG CATACCTTAA AGCTGTCAAG GATAAATTTC AGGATCAACG CGGAAAATAT GACGAGTTTC TTGAAGTCAT GAAGAATTTT AAATCTCAGA GAACTTTTCA AAGGACACCA AGAGTTGATA CAGCTGGTTT CAATACCTTC TTGCCAAAGG GTTTTGAGAT CACACTCCAA CCCGAGGATG GACAACCTCC ACTAAAGAAA CGTGTTGAGT TCGAGGAAGC TATTAGTTTT GTTAACAAGA CTAAGACAAG GTTTCAGGGC GATGATCGTG TATACATATC ATTTTTAGAC ATTTTAGACA TGTACAGAAA TGATAGCAAG TCCATCACTG AGGTCTACCA GGAGGTTGCC ATCCTTTTTC GAGATCATAA CGATTTGCTT GTGGAATTTA CTCACTTTCT ACCTGATACT TCAGCAACAG CCTCTGTTCA TTCTGTTAAA ACTTCAGTTC TTGACAGAGG GATTTCTCTG CCTGATAAGA AGGACCAGAG CATTACTCCA CATCGTGACC ATGACTATGG TACTGAACAT ACTGACCTGG ACCGAGAGAG ACCTCTGAAG AAAGAAAATA AAGAACACAT GAGAGGTAAT ACCAAAGAAA ATGAGCATAG GGATGCCAGA GATTTCGAAC CTCATAGCAA AAAAGAGCAA TTTCTCAACA ACAAGCAGAA ACTACATATT AGAGGCGATG ATTCTGCTGA AATTTCCAAT CAAAATAAAT TTTCAGGAGC AGTTCCTAGT TCATCTACTT ATGATGAAAA AGGTTACAGT CAAGATCTAG CTATTGTGGA TAGAGTAAAG GAAAAGCTTA ATGCCTCCGA GTACCAGGAG TTTTTACGTT GCCTTAATCT CTTTTCAAAA GAAATAATCA GCCGACCAGA ATTGCAATCT TTGGTGGGAA ATTTAATTGG AGTATATCCT GACCTCATGG ATTCCTTTAT AGAGTTTTTG GTGCAATGCG AAAAGACTGG ACTGCTCTCT GGTATTCTGA CTAAGAATAT ATCTATTTCT AGTGCTGAAA AGAAAACAAA ATCCATTCTA AACTATACTG CAGAATCCTT GTGGAGTGAA GGCAAATATC CTCAACCGTC ACTGGACAAT GATAGAGACC AAGAACAGAA GAGAGATGAC GGGTTTAGAG ACAGAGATCA TGATAAGGAA AGGCTTGAAA AAGCAGCTGC AAATCTGAAA TGGGCAAAGC CGATTAGTGA ACTAGATCTC TCGAACTGTG AACAATGCAC TCCTAGTTAT CGGTTACTTC CAAAGAATTA CCCTATTTCT ATTGCAAGCC AGAAGACATC TCCGTCACAT CAGGAAGTGA AGATTATTCA TTTAGCCACA TGCGCAAGAA CCAGTATGAA TGAAGAGAGC CTCTTCAAAT GTGAGGATGA CCGGTTTGAG CTAGACATGC TATTAGAGTC TGTGAAATTA TTGGCAAAGA TTAACAGTAA TGAACTGAAA ACCAACAGCC CCATCCATGT CGAGGATCAC CTCACAGGTA ATATAAGCTG GTGTAAAACA ATAAGCAGCA TGAAGGTTGA AACACTAGTA GCTGAGGGTA ATCATAGATT GAGGAATGAT ATCAAGATAG GTTCTGTTTC TTCAAGAATT GTAAAGAAAA AGTGGAAATA G 
Length1671
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9746081.. 9748772
Download Sequence
A.thaliana
AGI-codeAT1G24190.1
DescriptionSIN3-like 3
TAIR curator summaryEnhances AtERF7-mediated transcriptional repression. RNAi lines show ABA hypersensitivity. Interacts with ERF7 and HDA19.
Alias[ATSIN3][SIN3][SNL3][ARABIDOPSIS THALIANA SIN3 HOMOLOG][SIN3-like 3]
Gene coexpression
MR
MR Locus Description
10.6771 Ahg335550 Myosin heavy chain-related protein
20.347 Ahg912172
30.1993 Ahg926827 GDSL-like Lipase/Acylhydrolase superfamily protein
60.3324 Ahg924416
60.3987 Ahg952415
62.3137 Ahg934090
73.13 Ahg471434 nucleotide binding
86.1626 Virus3452
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression