Detail



ID : Ahg913433

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|913433|Al_scaffold_0001_3687
Sequence
ATGGAGTCGA AACCAAACCC TAGACGTCCT TCAAACACAG TTCTTCCATA TCAAACACCA CGATTACGAG ATCATTACCT TCTCGGCAAA AAGCTAGGCC AAGGCCAATT CGGAACAACC TATCTCTGCA CAGAGAAATC AACCTCCGCT AATTACGCCT GCAAATCAAT CCCCAAACGC AAGCTCGTTT GTCGCGAGGA TTACGAAGAT GTATGGCGTG AGATTCAGAT CATGCATCAT CTCTCTGAGC ATCCTAATGT TGTTCGGATC AAGGGGACTT ATGAGGATTC GGTTTTTGTT CATATTGTTA TGGAGGTTTG TGAAGGTGGT GAGCTTTTTG ATCGGATTGT TTCTAAAGGT CATTTTAGTG AGCGTGAGGC TGTGAAGCTT ATTAAGACGA TTCTTGGTGT TGTTGAGGCT TGTCATTCTC TTGGTGTTAT GCATAGAGAT CTCAAACCTG AGAATTTCTT GTTTGATAGT CCTAAGGAAG ATGCGAAACT CAAAGCTACC GATTTTGGTT TGTCTGTCTT CTATAAGCCA GGACAATATT TATATGATGT GGTTGGAAGT CCATACTATG TTGCACCAGA GGTGCTAAAG AAATGTTATG GACCTGAAAT AGATGTGTGG AGTGCCGGTG TTATCCTCTA CATCTTACTC AGCGGTGTTC CTCCCTTCTG GGCAGAGACC GAGTCTGGAA TCTTTAGACA GATATTGCAA GGGAAGTTAG ATTTCAAATC TGACCCATGG CCTAGTATCT CAGAAGCTGC TAAAGATTTG ATCTACAAAA TGCTCGAAAG GAGCCCCAAG AAACGCATTT CTGCACATGA AGCCTTGTGT CACCCATGGA TTGTCGATGA ACAAGCAGCA CCAGACAAGC CTCTTGATCC AGCAGTCTTA TCACGACTAA AGCAGTTTTC TCAAATGAAT AAGATTAAGA AAATGGCCTT ACGGGTAATT GCTGAGAGAC TTTCAGAGGA AGAAATTGGA GGTCTAAAGG AATTGTTCAA GATGATAGAC ACAGACAACA GTGGCACGAT AACTTTTGAA GAGCTCAAAG CGGGTTTGAA GAGAGTCGGA TCTGAACTGA TGGAATCAGA AATCAAGTCT CTTATGGATG CGGCTGATAT CGACAACAGT GGTACAATAG ACTACGGAGA ATTCCTAGCA GCAACATTAC ACATGAACAA GATGGAGAGA GAGGAGAATC TGGTGGCTGC ATTTTCATAC TTTGACAAAG ACGGAAGCGG TTATATCACC ATCGATGAGC TCCAGTCAGC TTGCACAGAG TTTGGTCTAT GTGATACACC TCTGGACGAC ATGATCAAGG AGATTGATCT TGACAATGAC GGGAAGATCG ATTTCTCGGA ATTTACGGCA ATGATGAGGA AAGGAGATGG AGTTGGGAGA AGCAGAACCA TGATGAAAAA CTTGAACTTC AACATTGCTG ATGCTTTTGG AGTTGATGGT CAAAAATCTG ATGACTGA 
Length1488
Protein Sequence
Protein Residue
Map Locationscaffold_1: 16619036.. 16621616
Download Sequence
A.thaliana
AGI-codeAT1G35670.1
Descriptioncalcium-dependent protein kinase 2
TAIR curator summaryEncodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4.
Alias[ATCDPK2][ATCPK11][CDPK2][CPK11][calcium-dependent protein kinase 2]
Gene coexpression
MR
MR Locus Description
5.09902 Ahg941391 CHY-type/CTCHY-type/RING-type Zinc finger protein
8.12404 Ahg941394 beta-amylase 3
9.48683 Ahg483087 PYR1-like 6
14.6969 Ahg946507 RING/U-box superfamily protein
15.8745 Ahg480465 protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases
18 Ahg484365 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta
18.5472 Ahg489028 5'-AMP-activated protein kinase beta-2 subunit protein
26.7208 Ahg934945 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
27.2213 Ahg479525 ubiquitin-conjugating enzyme19
27.7128 Ahg496632 GTP cyclohydrolase II
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression