Detail



ID : Ahg915561

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|915561|Al_scaffold_0008_312
Sequence
ATGGCTTCAA GAGCAGAGAT GCCAGAGACT GCGTGCAGAG AGATTTTGAA ATCATTTGAA GATGATAATG TTTCGAGAGT CATGCTTGTT GGTGAAGCTG GAATGGGTAA GACATGGATG GCTCGCAAGA TATTCCAGGA GGATCATGCT AAAGCGGGCT CTTGCTACAT TGCCCTCTGG TTGAGTCTGA ACAAAGATTT TGATGAAGTG TCCCTTTACG AGAATATAGC TTCTCAGCTA TCAATATTTC TTGATAAGGA AGAGAGTGAA GAGGATGATA GTGATGAAGA CGATAGTGAA GATGATGAGG ATCAGTTAAA TCGAGACTTG ATGAGCTTGA AAGATAAGAT ACACCTCAAA CTTTCGGAAA TTAAGCTTAT GGGTGAAGGA AGGAAATACC TTCTCTTGGT TTTGGATGAT GAAGGAAGCG TGACTAGTGA AAAAAAAGTG ATGAAAGATT TGCACCTTGT GGATTTTCTT GCACCTTATC GACCTCTAAA GATTCTTCTC ACCAGAAGAA AAGGGGAAGA AGATGCTATA TATAAGATGA AACCCCACGC CACGGCGGAT GAGCTACATG CTTACTCTGA TGGGAAAATC CAATCCCATA CCTTGGAGTC ACAGATTCTA CGCGACACCT TTGCAGGTTA TTATTTGGAG GATTTATTCG AGACCCTGAT CAAATATGAT TTACTCGAAT CCCTTGGGAA CGCCGATTAT CAAGGCTTCA TACATCGTAT CGTGGAAATG AGCATGGGTT TACCAGCTGC AGTTGTTGTG ATAGCCAAGT CTCTAAATTA CATTGCTCTG CGTGGGATGC GTCCATTCGC TCTTTCACTC AAGCAGGATG AGGTTCTGAA ACTAGCAGTT CTCTCCTCTT TTCCATCTGT TTCAGATCCT ACTATTGAGA GAGCTACTTC TAGTCACAAT CCTATTCTAC ATCTCGTGTA CGAGTTATTA AAAACAGATG ATACTGTGAA GAGTTCTATT GTTGACTGTT TCTGGCATAG CTTGAACTTC TTCGAGCACT GTGGGAGTGT TTATTACTGG GAGTTGATCG CACATTGGAT ACTTGAAGGC TACTTCGATC CTGTTAGATC AGTTACGAAG GCCTATATGG ATGCCCATGC TATCTTAATG GAGCTTATAA ACCGTGGTAT TCTGAAGATA CAAGAGGACA ATGTGGTTAT GCCAGAGATG GCAATGAAGA ATTTAATAGA TCTTCGCTGT CGTGGAATAC TAGCCAGATC TAGGATTTCA CTTGCTAAAG TTTGTGGTAG TGACATGAAA AAAGGTCTAG GGAAAATTAA CCAAGGGGAT GACATCATAG AAGCAGTGCG ACCGACTAGG AAAGGCAAAA TAATTACAAC AGTTCTGGTT AGTGGAAACC GTTTGCGTCG TGAAACTCCA GAGATTTTCT TTGGAACGCT GAAGGATCTT GAGATACTTG GCCTTTTTAA ACCCACATTG GATCATTTTG TCCCATCTTT ATTAACACTA GTGAAACTTC GAGTTCTCGT GATCAGGGAC TGTGACCGAC TGAAAGATAT AGAGGATCTT AAGTCTCTCG AAGGGCTACG TGTTCTTGAA GTTTCTGGTG CTAGCTCCCT GAAGAAAATC TCTGACGAAT TCTTTAAGGC ATTGTCTAAA CTTCAAAGTC TTCATCTCTC TGAGCTTCAG ATCACATCTT CCCCTTCCAG CATTTCTGAA CTGACGGAAC TTCATTGTCT CATCATCAAG GACTGTCCTT TATTGGAAGA TTTGCCAGAC ATACAAGAAC TAGTGAAGCT TGAGGTTGTT GATATTTCTG GTGCTCGTGG ACTTCAAACT TGCTTCGACA ACAGAAACTT TTATCATCTT ACACAACTTC AGCTCCTTGA CTTCTCAGAG AGCCAAATAG AGCGACTACC AATGTTCCAG GACTTTCTGG TGCCCGCCAG GCTTCACTCC TTGGCTCGGC TCTTGTTGCA TAACTGTAAA AAATTGAGAA AATTACCGAA TCTGAAGCCT TTGTCAGGTC TCCAAATTCT TGATCTTTCT GGCAGTTCTA GCTTAGTGAA AATACTGGAA GTATGCTTCG AGGATAAGAA GGAACTCAAA ATTCTTAATC TGTCAGGCAC TAATCTTTGC CAGTTGCCTT CCACCATTGA GGAGCTACCC AATCTCAGCG AACTCCTCTT AAGGGATTGC ACCAACCTAG AAGCTCTCCC AAACATTGCA AAGCTCAGAA ATCTCGAGAT CTTTGAAGTT CATGGTTGTA CTAAGTTGCA TAAGATTGAT GGATCATTTG AGGACATGTC TTACCTGCGT GAAATAGATC TCTCTGGCAC CAAAGTGATG AAACCACCGG AGTTGCCAAA GGAAAGCAAA CTCTATTGTA CAAAGCGTAT TACGCTAAAA GATAAAAGGC CTTTTAAAGG TAAGGATTGG AGTCAAGTAG TGAAAAACAT GCAAAGTGGG ATATCAGAGA ATTCTAGCTC CTCCGATGCA GTTGTTGAAT CCCAAGAAAT CTCAGAAAAG GAGTCTGGAG AAATTCAGTC GCATGAACCT GGTTCCAGTG ATTTTCCGGT CAGCATGGAA GATTTTGGCC AGTTTCCTAT ATACAGGGCT GTTTATCAGA AGTCAATACC CTTTGTTGAT TCTGAAAGTC ATCCAATAAT CTTGGAGATC CATGGGTCTA ATAGCCATGA TCTGGAGAAG GAAACCCTAG CTAAGGCTGA GTTTGTGTCT TTTGTGGACT GTAGCTCGAC ACGGCTTACA TCTGTCTTTA ACGAGATGAA ATCGGTGAAG GGTTGTTGGC TAAGGATGTG CAAGGACATT GAATACATTT TCGCTGGTGT GGAAGAGGAA CGTGTGGGAT CCCTGGAGGT TTTGTCGATT ACAAACCTTA GATTATTAAA AAGTTTATCA ATTGGTGGTA GCTTCAAGAA TCTGAAGAGG CTAAGCATAG ATTGCTGCCC GAATATCAAA ACGCTTTTCG TGGAAGCATC GCAGCTCCCT AGCAACCTAG AAGTCTTGCA TATAAAGTTC TGTGAGAACC TGGAGAAAGT GTCCATAGAA GGAGAAGTGT CAACTCTCAC TACTCTGTGC CTTCACGAGT TGCATGCGTT ATCAGCTGTT CAAGCCAACC TACCTAATCT CGAGAAATTT GATAAGTGGA ATTGCCCGAA CCTTCCAGCT GAAAAGGAAA ATCTCAGAGG CTTGGACAGA GAAACGGTTG AGCTCACTGA TGCATCACCA CAAGATTGA 
Length3249
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1695295.. 1698777
Download Sequence
A.thaliana
AGI-codeAT5G45510.1
DescriptionLeucine-rich repeat (LRR) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.16228 Virus3474
3.16228 Virus0316
9.59166 Ahg948552 phloem protein 2-A8
11.8322 Ahg944313
11.8322 Ahg939928
13.0384 Ahg907099 Calcium-dependent lipid-binding (CaLB domain) family protein
13.1909 Virus1898
14.6969 Ahg894794
15.2971 Ahg936500
15.2971 Ahg916535 Concanavalin A-like lectin protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression