Detail



ID : Ahg915798

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|915798|Al_scaffold_0008_549
Sequence
ATGGATACAC ACACGACTAA ATTAGTCGTG ATTTCACTTC TACTACTTCT CGTGATCTCC GATCACACTA GGCTAATGAT TCAGGTTCAC TCATACGTAC CATTTTGTGC ATACACATAC GATTATTTTT CTTATTGTCT AGACTTTCTG ACGGGATATC ACTACAAACC CGGTAAAAAA TGTTGTGTCC ATATCGTAAA ACTCAACATA ATTGCGAAAC ACAAAAAAGA GAATCCGAGG CTTTTGTGTA ATTGTGTTGA GATGATGACG AGAGGTTATA CGCCTCCAAT TTTGGCTGAT AAGATCCAAC AGCTTCCTCT TCTTTGCAAC ACACATCTCA GTTTCCCAAT CTCCTCTAGC ATGGATTGCT CCACGGTTTA A 
Length381
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3331171.. 3331545
Download Sequence
A.thaliana
AGI-codeAT5G44265.1
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
TAIR curator summaryEncodes a Protease inhibitor/seed storage/LTP family protein. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Virus0498
3.4641 Ahg472336
4.24264 Ahg480435
4.47214 Ahg905716
6.48074 Ahg481327 Protein of unknown function (PD694200)
6.7082 Ahg915870 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
9.94987 Ahg337272 Plant self-incompatibility protein S1 family
10.0995 Ahg924346
11.225 Ahg891327
11.6189 Ahg903660 Exostosin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression