Detail



ID : Ahg916056

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|916056|Al_scaffold_0008_807
Sequence
ATGGTTCTGA CTTGTGTGGT GGTGATTAAG TCAAGTTCCA GTTCAAAAGA GGAAACTTCC GTCAAGTTGC CTCAGCAATA TCCAAGAAAC AATGATGCAA TTGCTAGAAT CACCTCTCTT TTTATGGCTT CTTCTTCCTC TTCTCGTACT AGGTCATATG ATGTTTTCCC GAGCTTCAGC GGAGAAGATG TCCGCAAGAC CTTCCTCAGC CACTTTCTAA AGGAACTTGA TAGGAGACTG ATCCTTGCTT TCAAAGACAA CGAGATCGAG AGAAGCCGGT CACTTGATCC TGAGCTTAAT CATGCGTTTA AAGGTTCCAA AATCGCGGTG GTCGTGTTCT CCAGAAACTA CGCTTCTTCA AGCTGGTGTC TTAATGAGTT GCTGGAGATC GTGAGATGCA AGGAAGAGTT TGGTCAAATG GTGGTTCCTA TTTTCTACCA TTTGGATCCT TCCCATGTGA GGAAACAAAC CGGTGACTTT GGGAAGATGT TTGAACAGAC ATGCCAACAT AAAACAGAGG ACCAGAAAAT TAGATGGAGA AGAGCTTTGA CCGATGTAGC TAATATCCTT GGATATCATA GTGTGGCATG GGACAATGAA GCAAGCATGG TCGAAGAATT CGCTAATGAT GTTTTGGGTA AATTGACTTT ATCTCCATCA AATGTTTTTG AAGACTTTGT CCGAATTGAA GATCATATCA AAGAGATAAG TTCATTGCTG CACTTGGAAT CCGAGGAAGT GAGGATGGTG GGGATTTGGG GTCCCTCCGG AATTGGCAAG ACTACCATTG CAAGAGCTCT ATTTAGTCGT CTCTCTTGTC AGTTCCGAAG TAGTGTTTTC ATAGAAAAAG TTTTCATATC TAAGAGTATG GATGTTTACA GTAGAGCTAG TCTAGTTGAC TATAACATGA AGTTGCACTT GCAAAGAACT TTTCTAGCTG AAATTTTAGA CAAAAAAGAC ATAAAGATAG ATCATATAGG TGCAATGGAA AAGATTCTAA AGCACCATAA AGTTCTTATC TTTGTTGATG ATTTGGATGA CCAAGATGTC CTAGATGCCT TAGTGGGTCA AATATTTAAA ACAACCATAT GGACAATCAA GGATTTGCTT GCTGATTTTT CCATGTTTGT GATGCAAATG AAAAAAAACT TTGAAATGGA GAAACATGAT GAATCAAATG CAATATTGTG A 
Length1191
Protein Sequence
Protein Residue
Map Locationscaffold_8: 5568557.. 5570026
Download Sequence
A.thaliana
AGI-codeAT5G46470.1
Descriptiondisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summaryEncodes RPS6 (RESISTANT TO P. SYRINGAE 6), a member of the TIR-NBS-LRR class resistance protein.
Alias[RPS6][RESISTANT TO P. SYRINGAE 6]
Gene coexpression
MR
MR Locus Description
4 Virus1111
8.06226 Virus2687
9.16515 Ahg935801
12.49 Virus2939
16.1245 Virus1587
16.5227 Virus1976
17.088 Ahg951920
23.4094 Ahg924200 RNI-like superfamily protein
26.4575 Virus1281
28.1957 Virus3538
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression