Detail



ID : Ahg916441

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|916441|Al_scaffold_0008_1192
Sequence
ATGGCGTCGA ATTCGGAAGC GGGAGGATCG GCGGATTACG AAACATTGAT GTCAACATCG GACGTTGAGC TCTTGAAGAG GGCGTGGCGT AACGAGAAGG CGGCGCCGGA GATTCTTCAG TACGAAGGAG CTCTTGTCGA TAGAGCCAAA GAACAGATCG AATTGGTGGA AGAAACAATT GACGATTATG TGGAAAATGG CATAGACCCT CTCGTGGTGT CACTTTATCA GATGGATTTA GACAGAACCC AGTTTCTACT CAGATCTTAT CTCAGAGTTA GGCTTCTCAA GATAGAGAAG TTTATGTTTC ACAACCTCAA GTCGGAAGAA GCTGAAAGGC GGCTTTCTGA GCAAGAGAAA GTGTTTGCTA CCAGGTGTGC TGATGATTTG GCAAAGCATT TCGAAGAGAC TGTACTGCTT AAGTTACCCG AGAATTATCA GTCGGTTCTC AAGCAATCTC TCATAAGTGA AGTGGATGAT ACGGTGCCGC AGCCGCATTT GGATACCTTT GTTGTTTGTA GAAGCAAGAA CTTTGTCTCC CTCAATCTAT ATGAAGAAGG AGAGAGCCCC GAAACCGTGG AAATGGAGCG CGGTGATCTC TACTTCATAC GTTACAAGAT TGTAAAAAGG GCAATCGAAT CTGGGCAAAT TGACTTGATC TGA 
Length663
Protein Sequence
Protein Residue
Map Locationscaffold_8: 11771872.. 11773455
Download Sequence
A.thaliana
AGI-codeAT5G49010.1
DescriptionDNA replication protein-related
TAIR curator summarySimilar to the SLD5 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication.
Alias[EMB2812][SLD5][EMBRYO DEFECTIVE 2812][SYNTHETIC LETHALITY WITH DPB11-1 5]
Gene coexpression
MR
MR Locus Description
9 Ahg331329 DNA replication protein-related
28.3019 Ahg939817 metacaspase 9
34.8712 Ahg944532 Ribosomal protein S14p/S29e family protein
43.2897 Ahg331330 methyltransferase 1
53.4416 Ahg495258 TCP family transcription factor
53.8331 Ahg485881
66.1816 Ahg913492
77.6338 Ahg922933 minichromosome maintenance (MCM2/3/5) family protein
95.734 Ahg918924 importin alpha isoform 6
96.7419 Ahg944084 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression