Detail


ID : Ahg917070

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|917070|Al_scaffold_0008_1821
Sequence
ATGGAAAAGC CAAAGTTCAA GACTGTCCAA GAGCTGCTTG CAGCCGGAGA AAAACTACCG GAAAGATACC TCTGCACCCC AACAGGCGAC GGAGAAGGTG ATCAACCTTT CAACGTTTCG ATGCCGGAAA TGGAAATTAT GGTCATCGAT CTTAGTCTTC TCCTCTCTTC TTCTGATGAC GGTCGAGAAG AGTTGAGTAA ACTTCACTCA GCGATCTCTA CATGGGGCGT TGTTCAGGTG ATGAATCATG GAATTTCAGA AGCCTTTCTC GACAAGATTC TCGAGCTAAC GAGGCAGTTC TTTGTGCTTC CGACCGAAGA GAAACATAAG TACGCAAGAG AGATTAGTAG TTTTCAAGGA TTTGGAAACG ACATGATTCT GTCTGATGAT CAAGTTCTTG ACTGGGTCGA CCGCTTGTAC CTCATTACTT ATCCTGAAGA TCAACGACAG CTTAAGTTCT GGCCTAAAAT CCCAAGCGGA TTCAGGGAAA CTTTACATGA ATACACAATG AAGCAACAGC TAGTGGTTGA GAAATTCTTC AAGGCATTAG CTAGATCGTT GGGGTTGGAA GATAATTGCT TTCTAGAGAT GCATGGTGAA AATGCTACGT TGGAGACAAG ATTCAACATG TATCCTCCAT GTCCGAGGCC GGACAAGAAA AATGTGGATG GACTTCAGTT CCTCAAAGAT GGGAAGTGGT ATAAAGCTTC AATCCTCCCT CATACAATTC TGATCAATGT AGGAGATACT ATGGAGGTAA TGAGCAATGG AATATACAAG AGCCCGGTTC ATAGAGTGGT GCTTAACAAC GAAAAGGCAA GGATATCTGT GGTAACGTTT TGTGATGCTG ATGAAGACAA AGAGATTCAA CCTGTAACTG AGCTTGTGTC TGAGGCTAGA CCAAGATTGT ACAAAGCAGT TAAGAAGTCT GAGAAGAACT TCTTCGATTA CTATCAACAA GGTCGAAGAC CGATCGAAGC TGCATTTATC TGA
Length993
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15216524.. 15217959
Download Sequence
A.thaliana
AGI-codeAT5G54000.1
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.8324 Ahg492665 root hair specific 14
16.7332 Ahg896412 Protein of unknown function, DUF617
17.8885 Ahg932514
20.3961 Ahg948369 GDSL-like Lipase/Acylhydrolase superfamily protein
20.5913 Ahg470212 Outward rectifying potassium channel protein
22.1359 Ahg947721
24.2487 Ahg477689 response regulator 22
27.3313 Ahg495243 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
39.4968 Ahg898532
41.7133 Ahg476285 Transmembrane amino acid transporter family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression