Detail



ID : Ahg918244

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918244|Al_scaffold_0008_2995
Sequence
ATGGGAGAAG AAGAAGCGCG TAGTTGGATT CGCGGAGATG AAACCGCGAA GCAGATGTTA TCAAGGGTTC TTAAAGACCG TGCATTCATG CTTCTTCCGC CTCTTCACCG TGTACCTTTA CGCGCCGGGA ACGTAGTCGA GATCACCGGC GCATCTCCGT CTGCGAAAAC TCAGATCCTG ATTCAAGCTG CGATCAGTTG CATTCTTCCT AAAACGTGGA ACGGCATTCA CTATGGAGGA TTAGGGAAAC TGGTTTTGTT TCTCGATTTG GATTGTCGCT TTGATGTTCT CCGGTTATCT CAAATGCTCA AGCATCGTCT TCTTCAAGCT AACCGGTTAG GAAATGGAGC ATGGTGGCAA CTTGAAGAGT CAAATGTTAA GAGTTGCATA TCTGCACAAG AGAAGCCAAA GACTGTGTTT GATGAGGAGT TATATGTTTC ATGCATGAAA AGGTTTCTGT ATGTTCGTTG CTATGATAGT CTTGAGCTTT TGTCCAGTCT CAAGACATTG CATTACCGGA TCCGACAACA GGAAGCCTGT GGAAGTCAAG TCGGAGTGCT TATGATTGAC AGCATTGGTG CTTTCCACTG GACTGATCGT CTATCATCAT CATTGGCATT GGAGACACAT AACAGGAAAA GTCTGTCCCT AACGAATGTG GTGGAGACGA TAGTGCAAGA GTTGAAGAAG CTCCTGCAGG TGCATTCGCT GGTAGTACTT GCCACTAAGG TTACAATTTA CGAAGAAAAG TACCCAGCAG TTGAGAATAA TCGAAAGTTC TCCTCAAACG ACGATTTTTC AGGGAACGCT GCAAGTAAAG CTCAGCAACC TCTAATTCGT GAATTCATGC CTTCTTCTTG GCAGGCATTT GTAACACATA AGATAATCAC ACGAAAATCT GCTGATCATC GGTCTTTACA AACGGGGCAA CAAAATTTGT CGGCATATTT ACTTGAATGG CTACAACCGC AACTCAGTAG CATAGATCGA TTCATAGTAG ACGATGTAAG GAAACATACA ACCATTGCAA GTCTTGCAAA GCCATTTTAC TCTAAACTAT TACTCATATA TTGTTTTTCC TGCTTCATCA TCTCATGCAG TCCGGTATTG TCATTGTCTC GTGACCTAGA TTTCACTTCA GGTATTCTTC AATATCTCTT TCTCTCTTAG 
Length1170
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20202376.. 20204651
Download Sequence
A.thaliana
AGI-codeAT5G64520.1
Descriptionhomolog of X-ray repair cross complementing 2 (XRCC2)
TAIR curator summaryEncodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.
Alias[ATXRCC2][XRCC2][homolog of X-ray repair cross complementing 2]
Gene coexpression
MR
MR Locus Description
16.1245 Ahg327448 Trimeric LpxA-like enzymes superfamily protein
55.7763 Ahg893724
66.3023 Ahg481700 alpha-L-fucosidase 1
68.2642 Ahg938260 FUS3-complementing gene 1
79.1833 Ahg479367 DHHC-type zinc finger family protein
82.9096 Ahg339169 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression