Detail



ID : Ahg921343

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921343|scaffold_102624.1
Sequence
GCTTTCCTAA ACTTCAAACC ATGGTTGGAG GAGCAAGTGC ACAGAAGCCA ACTACAAATG ACGCTCTTGC ATACCTTAAA GCCGTCAAAA AAAAAAAATT CAGGGATGGA CAACCTCCAC TAAAGAAATG CAATGAGTTC ATGGACGCAA TTGGTTTTGT TAACAAGATT AATACTAGGT TTCAAGGCGG TCGTTCATAC AAATCATTTT TAGACATTTT AAACCTCTAC AGAAAGGAGA GAAAGTCCAT CAAAGAGGTC TACGATGAGG TTGCTATCTT GTTTCGGGAT CATTCGGATT TGCTTGCGGA GTTTACTCAC TTTTTGCCTG CTACTCCAGC AACGGCCTCG TTTCATTCTC TTAAACCTCA AGTGCGTGAC ACAGAGATTT GTGTGCCTAT GATGCATCAA ATGCACTATA AAAGCATCCA CTGTTTTGCA GCTGCTATGA TGTTCTTAGT TTCTTTTTTA ATATGGTATT TTTGTGTGCA ACCACAGTTT GGCATAGATC ATCCTGAGGA GTTGAATTCA CAAGGGATTG CTATGTTATT TCAAGCGCTT CACATATAGC TAAGTAGTAT TTTTTTACA 
Length589
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9725745.. 9726784
Download Sequence
A.thaliana
AGI-codeAT1G24190.1
DescriptionSIN3-like 3
TAIR curator summaryEnhances AtERF7-mediated transcriptional repression. RNAi lines show ABA hypersensitivity. Interacts with ERF7 and HDA19.
Alias[ATSIN3][SIN3][SNL3][ARABIDOPSIS THALIANA SIN3 HOMOLOG][SIN3-like 3]
Gene coexpression
MR
MR Locus Description
7.2111 Ahg932663 Eukaryotic aspartyl protease family protein
10.6771 Ahg944993
11.4891 Ahg920887
20.7364 Ahg497089 RALF-like 30
21.5639 Ahg891116 Fcf2 pre-rRNA processing protein
23.2379 Ahg926315 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein
27.3313 Ahg948922 Protein of unknown function (DUF784)
27.5681 Ahg908046
37.4166 Ahg949957 Carbohydrate-binding X8 domain superfamily protein
43.1277 Ahg494168
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression