Detail



ID : Ahg924811

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924811|scaffold_200372.1
Sequence
TGAGTGAGTT GAGAGATCAT TATGTGTTCT CTGATACTCC ATGGAAGAAG GTTGGTCCAG TTACAGAAAT GGTGTCATTT GAGTTTTTCA GTGCAAAAGG CTTCTTCTTT TTCCACTGTG AGCACTAAAG ATTGTCGAAA AGGGGAGATT TTTACGATCT CTTACAGTTA CCTCGTTGAT TCTCTTGGTT TAACTAGAAA GCTCGCAGAA TCAATCTCCG AGGGCAAGGC AAATCCTGAG TCAGTTCGGA GTCTTTTGAC TAGTCATGGG TTCACAGATT CTCAGATCTC CAGCATCATT ACGATTTATC CACGATTGTT TTTATTAGAT GCTAAGAAAT CACTTGCTCC CAAGCTTAAG TTTTTGCAGT CCAGAGGAGC TTCAAGCTCT GAGCTCACCG AGATTGTATC AAAGGTTCCG GAAATATTGG CAAAGAAAGG AGACAAAACG CTAAGCAGAT ACTATGATTT CGTCAAAGTC ATTGTTGAAG CAGATAAGAG TTCCAATTAC GACAAGTTAT GTCATTCTTT GCCTGTGGGT AATCTAGAGA ATAAAATCCG GAATATATCG GTTTTAAGAG AACTCGGTGT GCCTCAGAGG TTGTTATTCC CTTTGCTCAT CTCTAGTGGG GGACCTGTCA ATGGGAAAGA AAGGTTTGGA GAATCCATTA AGAAGCTTGT TGAGATGGGT TTTGATCCGA CCACTACAAA GTTTGTTAAA GCTCTGCGCA TTGTTCAAGG ATTAAGCGCA AAAACAATAG AAGAAAAAGC CAATCTCTAT AAAAGTTTAG GCTTTGATGA TGTATGGGAA ATTTTCAACA AATATCCAAT CTTTCTGGCG CTCTCTGAGA AGAACATATT GAACTCTGTA GAAACATTTC TAGGTCTAGG ATTCAGCAGA GATGAATTTG CAAATATGGT CAAGAGCTTT CCTCAGGGCA TTGGATTATC CGCAGAGACG GTTAAAAAGA AGACCGAATT TCTGGTGAAG AAGATGAATT GGCCACTAAA GGCCCTGGTT TCAAACCCTG CGGTACTTGG ATACAACATG GAGAAGAGGA TTGTACCAAG GTGTAACGTA ATTAAAGCTC TCATGTCCAA AGGACTGCTC GGAGACACAG GAAGCAAACT CCCTCCAATC GGGTCTGTTT TGAAGAGTAC CAATCAGGTC TTCTTTAAGA GAAGGTCAGT CGAGTTGCAG AAATGGCGTA ACTTGAGAGT TTCAGTGCCA AATGCATCTT CTTTTTTCAA TTTGTTTTCC TTTGCTACTA CTGCTGCACA TTTGAGTCCT AGAGTTGGTC GAAAAGGAAA GGACTTTACT TTCTCTTACC TCGTTGATTC ATTAGGTTTA CCTAAAAAGC TCGCAGAATC GATTTCAAGG AAAGTCAGCT TCGAGGACAA GGGCAATCCT GATTCTGTTC TGAGTCTTTT TAGATGTCAG GGGTTCACTG ATTCTCAGAT CTCTAGCATG ATTGGGATTT ACCCACGATT GCTTTTACTA GATGCTGAGA AATCCCTTGC TCCCAAGCTT CAGTTTTTGC AGTCCAGAGA AGCGTCAAGC TTTGAGCTCA CTCAGATTGT TTCAAAGGTT CCGGAAATAT TAGGAAAGAA AGGGGACAAA ACTATCAGCG TATACTATGA TTTCATCAAA GACACTTTAC ATGATAAGAG TTCCAAGTAC GAAAAGTTGT GTCATTCTTT TCCACCGGGT AATCTAGAGA ACAAGATCAG AAATGTATCG GTTTTAAGAG AATTGGGAAT GCCTCACAAG TTGTTATTCT CCTTGCTCAT CTCCGATAGC CAACCTGTAT GTGGAAAAGA AAAATTTGAA GGAACCCTCA AGAAGGTTGT TGAGATGGGT TTTGATCCAA CCACCGGAAA GTTTGTCGAA GCTCTAAACG TTATTTACAA AATGAACGAG AAAACAATCG AAGAAAGATT CAATCTCTAT AAAAGCTTAG GCTTTGATGC GGGAGATGTA TGGTCAAGTT TCAAAAAGTG GCCAATCTCT CTGAGAGTAA CGGAGACGAA GATGTTGGAC TCCATTGAAA CATTTCTTGG CCTAGGATTC AGCAGAGATG AGTTTACGAA GATGGTCAAG CACTTTCCTC CGTGCATTGG ATTATCTCCA GAGATGGTCA AAAAGAAAAC TGAGTTCTTG GTGAAGAAGA TGAATTGGCC ACTAAAGGCT CTGGTTTCAA ACCCTGCAGC ACTAGGATAC AGCCTGGAGA AGAGGATCGT CCCAAGGGTC TCGGTGAAGA ATATGTTGAT CTCCATTGAA GCATTTCTAG GTCCAGGATT CAGCAGAGAT GAGTTTGCCC TGACATGAAG CTACTACAAC CATAATTG 
Length2348
Protein Sequence
Protein Residue
Map Locationscaffold_2: 1903573.. 1908765
Download Sequence
A.thaliana
AGI-codeAT1G61970.1
DescriptionMitochondrial transcription termination factor family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.083 Ahg480906 Tetratricopeptide repeat (TPR)-like superfamily protein
23.3666 Ahg925061 Ubiquitin-like superfamily protein
54.2402 Ahg490266 GTP binding Elongation factor Tu family protein
55.1815 Ahg948905 Protein of unknown function (DUF565)
77.2658 Ahg937551 hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein
77.7303 Ahg482278 Ribosomal protein L14p/L23e family protein
80.8208 Ahg488513
90.233 Ahg934834
91.2907 Ahg470476 O-fucosyltransferase family protein
94.4246 Ahg947562 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression