Detail



ID : Ahg925532

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925532|scaffold_201093.1
Sequence
TAGCTTGGAG GATTAAAAAC ATGACTATTG CTTTCCAATT GGCTGTTTTT GCATTAATTA TTACTTCATC AATCTTACTG ATTAGTGTAC CCGTTGTATT TGCGTCTCCT GATGGTTGGT CGAGTAACAA AAATGTTGTT TTTTCTGGTA CATCTTTATG GATTGGATTA GTCTTCTTGG TGGGTATCCT TAATTCTCTT ATCTCTTGAA TTCATTCGTT GCAGATCCA 
Length229
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8226115.. 8226343
Download Sequence
A.thaliana
AGI-codeATCG00300.1
DescriptionYCF9
TAIR curator summaryencodes PsbZ, which is a subunit of photosystem II. In Chlamydomonas, this protein has been shown to be essential in the interaction between PS II and the light harvesting complex II.
Alias[YCF9]
Gene coexpression
MR
MR Locus Description
8.60233 Ahg315521 Photosystem I, PsaA/PsaB protein
8.60233 Ahg356183 Plant protein of unknown function (DUF827)
22.5389 Ahg925489 ATP synthase subunit C family protein
27.5681 Ahg333071 NADH dehydrogenase family protein
31.749 Ahg315511 CemA-like proton extrusion protein-related
37.3497 Ahg925483 photosystem II reaction center protein M
41.5692 Ahg475584 ATP synthase subunit alpha
41.7493 Ahg925494 photosystem II reaction center protein K precursor
43.8292 Ahg925484 RNA polymerase subunit beta
44.4972 Ahg925488 ATPase, F0 complex, subunit A protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression