Detail



ID : Ahg927384

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927384|scaffold_202945.1
Sequence
TTTTTTTTGC AGTTGAGACT GATATGCAAG CTGGAGCACA GTACAAATAT GAGTTACTCT GGATCATATT GTTGGCCTCA TGTGCGTCTT TTGTGATTCA GTCTCTGGCT GCTAATCTAG GTGTTGTCAC AGGAAAACAT TTAGCTGAGC AATGTAGATC AGAGTACCCA AAGGTTCCAA ACTTTATGTT ATGGATCATT GCAGAAATTG CAGTTGTCGC TTGTGACATA CCTGAAGGCA TCAACACTTC TTTACTCTTT TGTTACTTAA TCGGAACCGC TTTTGCTCTG AACATGCTCT TTAGCATGCC GGTATGGATT GGTGTGCCTC TGACAGGCTT AAGTACTATG GTTCTTCTCA AAATTCAAAA ATACGGGGTG AGAAAGTTGG AGTTCTTGAT TGCAATTCTT GTATTCACAA TGGCTATAAG CTTCTTTGTT GAGCTTCACT ACTCAAAGCC CGACCCAGGA GAAATCCTAC ATGGTCTCTT TGTTCCTCAA CTGAAAGGAA ATGGTGCAAC TGGTCTCGCA ATCTCTTTGC TCGGAGCCAT GGTTATGCCG CATAATCTCT TCCTCCACTC GGCCTTGGTT CTCTCTAGAA ATATCCCTCG TTCCACTACT GGCATCAAGA AAGCTTGCAG GTTTTACTTG ATAGAAAGCG GATTGGCTCT AATGGTGGCA TTTCTCATAA ACGTCTCTGT GATATCAGTA AGTGGTGCTG TTTGTAATGC CCCGAACTTA AGCCCTGAAG ATCGAGCTAA TTGTGAGAAT TTGGACTTAA ACAAGGCTTC GTTTCTGCTC CGGAATGTTT TGGGGAAATG GAGCTCAAAG CTATTTGCGA TTGCGCTTCT TGCTTCTGGT CAGAGCTCGA CGATAACAGG AACTTATGCT GGACAATACA TAATGCAAGG ATTTCTTGAC CTAAAACTCA AGCCATGGCT CAGAAACTTA CTAACACGAT GTTTAGCTAT AATCCCGAGT CTAATCGTTT CTCTCATTGG TGGTTCTGCT GGAGCCGGAA AGTTAATCAT CATTGCCTCG ATGATCTTGT CCTTTGAGCT CCCGTTCGCG CTGGTTCCCC TCTTGAAATT TACAAGCTGC AAAACCAAGA TGGGTTCACA CGTCAACTCA ATCTGGATCA CAGCTTTGAC TTGGATTATT GGATTACTCA TCATGGGAAT AAACATATAC TATATAGTAA CCAGTTTCAT CAAGCTGCTT CTCCATAGTC ATATGAAGCT TGTCGCCGTC ATCTTCTGTG GAATTATTGG GTTCGCAGGT ATTGCTATCT ATTTAGCGTC CATAGCTTAC CTTGTCTTGA GGAAAAACAG AGAAGCCACT CCTCTCGTGG AGACACTCCC AAGACAAGAC ATTGTCAACA TGCAGTCCGA TGTTACCTTG TAGAGTGTCT ACGTCCCATG TCG 
Length1423
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17680368.. 17682473
Download Sequence
A.thaliana
AGI-codeAT1G80830.1
Descriptionnatural resistance-associated macrophage protein 1
TAIR curator summaryThought to be involved in iron homeostasis. Induced in leaves in response to iron deficiency. Transgenic plants accumulate toxic levels of iron. Gene complements yeast iron uptake mutants.
Alias[ATNRAMP1][NRAMP1][PMIT1][natural resistance-associated macrophage protein 1]
Gene coexpression
MR
MR Locus Description
29.8161 Ahg477666 NAC domain containing protein 47
60.4152 Ahg483895 myb domain protein 2
67.2161 Ahg893702 Sodium/calcium exchanger family protein
83.7616 Ahg311334 NAC domain containing protein 48
84.6404 Ahg487053 glutathione transferase lambda 1
87.0689 Ahg923116 cell wall / vacuolar inhibitor of fructosidase 1
96.1249 Ahg481925 UDP-Glycosyltransferase superfamily protein
96.6695 Ahg937308
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression