Detail



ID : Ahg928396

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|928396|scaffold_300853.1
Sequence
ACAGGTTATT CTCTGTATCG ATGGATCCTC ATTCATATTC TGCAAAACAG GTGGGGGATG AATTTGCAAG GCAATACTAT CAGACCTTGC AAAACTCCCC GGAGAATCTC TATACGTTTT ATAAAGATAA CAGTACGATT TCACGGCCTG GACTAGATGG AACGATACGT GTCTTCACTT TATCGGATGT GGATGAGAAT GATCTTAAAA TGCAATCTTC TGATGGTTTT GATTCGGTTG TGATAACCAG TGTCACGTCC CAAGATTCTC ATGAGCAGGG TTTCCTCGTG GCTGTTTATG GCTGCTTCAC TTTCAACGAG AGACCTGCAA AGCACTTCAC ACAAAGTGTC TTTCTTGCTC CCCAAGAAGA CGGCTACTTT GTTTTGACCG ACATATTCAA GTTTGTTGAT ATACCCGAGG TTAATGCAGC CATTCCACCT GCTAATGATG TCACGGAGGA GAAAGTTCCA GAAACGGAGG AAGCTGCACT GAGAGTTTCC GAACCAAGTC AAGGTTTTGA AAATGTTCCC AAGCTATCTC ATGCCTCGGT TGTAAGTGGA CACTCCAATC ATCAACATTC TTCGTCTTGT GGTTATTCTC CAGAGATAAA ACCTAGAAAT GGGAACAGTC AGGAGTCTCG AGCGGTATCT GAGGCATGCA TTTATCTTCA TTGGCTTCCT ACAAAAACAA CCGTTGCCTT GGTTGAGAAT GCATTTAAGC AGTTTGGAAA AATTAGAAGA GGTGGAGTTG AACTTAGAAG CAAAAAGAGA TATAAAGGGA AATATGCTTA TGTGGAGTTT GAGGAAGCAG AGGCCGCCAA CAGGGCAATA ATGGCGTCTC CTCTAAGTAT TTTTGGGTAC AGAATTACCG TGCAGAAGAA TCGATCTTAC CTTAAAGGTT ACTGTGAAAT TCCATCCGCT GGACCAGGAA ACATACACAG AGGCGAGGGA GTGAGAGGAT CACTAGGTAA CCCCTTTTAT AACTGGCAGA AGATGATGGA GGAAGTGAGA GAAACAGACG TCTGGCAGAA GTTAATGATG GGATCGAGAG GAACAGAAGT TTATGACTTG CACAACTGGC AAAAGATTAT GGATCAATCG GAGGAGCAGA TGAAGTTTCA GGAGGAACAA GGACGACAAT ACAATCACAA CAGATATACA AGCGAGGAAG TGAGAGGAAC AGAAGAATTT GGTCTGGAAG AAGAAGAAGA AGAAGAGAAC CAAAACTGGG AGACTTTAAC GGAGGAACAG GGGAAGATTC AGGAGGAAGA AGGGCGACAA TACAATCAGA ACAGATATAC AAGGGAGCAA ATGAAAGAAA CAGGAGGACT AGGGGATGGA TTTGCAGAGA ACTACTATAA GACCTTGCAA AACTCCCCGA AGCTTCTCCC TCGCTACTAT AAAGATGTCA GTAAGATTAC ACGGCCTGGA CTTGATGGAA CGATGCGTTC CTCTACCCTA CAGGATATGA TTGAGGATCT TGATATGCTA TCTTCTAGTG ATTTTGATAC GGTTGAGGTA ACCAGTTTCA TCTCCCAAGA ATCTCATAGT GGGGGTATCC TCGTCGTTGC TGATGGCTAC TTCACTTCAC AAGAGAGACC TGCAAGGAAC TTCACACAAA ACTTCTTTCT TGCTCCCCAA GAAAAAGGCT ACTTTGTTTT GTCTGACATG TTCAAGTTTG TTGACATCAT CTCCGAGGCT AATGATGCGA TAACTGAAGG TGCAGCCATT TGCGTTAAAA AACTTCCTCC TGATGCAACC ATTACCTTAG TTGAGGATGC ATTTAAGCAG TTTGGAGAAA TTAGAAGAGG TGGAGTTGAA GTTAGGCACA AAAGGAGCTT TTCTTATGGC TTTGTGGAGT TTAAGGAAGA AAGTGCCGCC CAGGCAGCAA TAGAGGCTTC TCCTGTAATG TTTGATTGGC GTAGCGTTTA CGTGGAGAAG AAGCGACCTG ACTATATAGA TGAAGAATCA CTGAGAGTTT ATGAACCAGA GGATGATGAT ACTGGAAATG AGAATAATCA AGAGTCTCAA GCGTTATATG AGAGTTGTGC AGTTCACGTT AGAAACCTTC CTCCAAATGC AACCACTGAC TGGGTAGAGA ATGCATTTGA GCAGTTTGGA CCAATCAAAA GAGGAGGAGT TCAAGTTTTT AACCCTGGTT TGGACGATTG GTTTGGTTTT GTGTGGTTTG TGCACGCAGA TGCTGCCGAG AGCGCAGTAA AGGCATCTCC TCTATGGGTT GGTCAGCGAA AGCTTAAAGT GCAGAAGAAG CTTCGGCGAG TGCAGGAACA GAACTGAACC TGACTAGTTA TGTAGAT 
Length2317
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2854682.. 2859366
Download Sequence
A.thaliana
AGI-codeAT3G07250.1
Descriptionnuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
40.8289 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
55.2992 Ahg950383 Auxin efflux carrier family protein
64.2495 Ahg943128
65.3299 Ahg926304 Protein of unknown function (DUF1163)
84.4689 Ahg321478 Fatty acid hydroxylase superfamily
92.5635 Ahg351609 Protein of Unknown Function (DUF239)
97.3499 Ahg355455 DNA (cytosine-5-)-methyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression