Detail



ID : Ahg928481

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|928481|scaffold_300938.1
Sequence
TATATACTGA GTAAAGAGAA CATGCTGGCG GCTCGGCAAG AGGGCTTTCT GAAGAAATTC AATCTCACCA CGACAAGTGC TACAAGCAAT ATGCATCTCT TTGATAAAGA AGGTGTGATA AAGAAATATG CGACTCCAGA ACAAATCCTT GAAGAGTTCT TTGACCTCAG GCTTGAATAC TATGAGAAGA GAAAGGAAAT TATGCTGAAG AATCTGGAAC TTGAGCTGCT GAAACTAGAA AGCAAAGTGA AGTTTATTCG TGGATTTCTC AGTGGTGAAA TCAGAATATT TAATAGAAAG AAAGCTGATA TTGCTCAGGA TTTGAGACAG AGAGGGTTCA CACCAGTTCC GAAGAAGGCC ACAGTTAGTG GAACAAGTGA TGCAGCTGAA GAATCTGAGG ATGAGTCAGA GTCAGACTAT GACTACCTAG GGAAATTGAC TATGGAAATG TTTTCTGTAG AGAAAACTGA GGAGTTATGT GCAGAGATAG ATAAAACGAA GGAACAACTT GAATACTTGA AGAAAGCCAT ACAAGATCCC TCTGGCTCAG AGACCTAGAG TCTCTTGATA TGGATTCA 
Length578
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10497705.. 10498231
Download Sequence
A.thaliana
AGI-codeAT3G23890.1
Descriptiontopoisomerase II
TAIR curator summaryEncodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues.
Alias[ATTOPII][TOPII][topoisomerase II]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg922845
2 Ahg916655 LOB domain-containing protein 5
3.87298 Ahg952060 Cytochrome b561/ferric reductase transmembrane with DOMON related domain
4.24264 Ahg481347 Protein of Unknown Function (DUF239)
9.21954 Ahg930584
9.21954 Ahg950610
9.38083 Ahg949082
9.94987 Ahg929549 Plant self-incompatibility protein S1 family
10.4881 Ahg917268
10.9545 Ahg887570 low-molecular-weight cysteine-rich 55
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression