Detail



ID : Ahg932546

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932546|scaffold_400534.1
Sequence
TAGACCATCA ACCACAGAGC ATGAGCGCTT TATCTACTTG GAAAGATCAT CTTAAACCCA TTATATGGCC TGGAAAGGTT GATGTTGTTC CGAAAGGATG GGAGATCCCA ACAAATGGGA AGAAGTTGCG CATCGGAGTT CCAAAGAGAA GTGGTTACAC CAATCTCGTG AAGGTCACAA GGGATCCTAT CACAAACTCA GTGATAGTCT CAGGTTTGTG CATAGATATC TTAGAGGCTG TGATTCGAGC AATGCCTTAT GATGTCTCCT ATGAGTTATT TCATTTTGAG AAACCCAATG GTGAACCAGC CGGTGATTAC AACGAATTGG TGTACCAAGT GTACCTCGGG AGATATGACG CAGTTGTGGG AGATATAACC ATACTGGCGA ACAGGTCCGC TTATGTCGAC TTCACATTTC CATTCCTTAA GTCAGGCGTG GGATTGATTG TCCCAATGAA AGACGAAGTG AAGAGAAACA GTATCAGTTT CTTGATGCCT TTAACATGGA AGTTGTGGGT GACTTCCTTT GTCTTTTTCT TCCTTATTGG CTTTACTGTC TGGGCTCTTG AACATAGGAT TAATCCGGAC TTTCGTGGAC CAGCTAATTA CCAAGCTAGT ACCATATTTT GGTTTGCCTT CTCTACCATG GTTTTTGCTC CAAGGGAAAG AGTATACAGC TTTGGAGCTA GGCTTCTAGT TATCACATGG TACTTCATTG TTCTTGTGTT GACTCAAAGT TACACAGCCA GTTTGGCGTC AGTTTTGACA TCACAAAAAC TAAATCCAAC CATAACCAGC ATGAGTAGCT TACTTCAAAG AGGAGAAAGA GTGGGTTATC AGAGACAATC CTTCATCTTT GGAAAGCTTA ATGACACAGG TTTCTCGAAA TCTAGCCTTG TGCCCTTTGA TACCACAGAA GAATGCCATG AGCTTCTCAG AAATGGCACA GTGTCTGCAG CTTTTTTGGA AACACCTTAC TTGAGACTCT TTCTTGGACA ATATTGCAAC ACTTATAAAA TGGTTGAAGA ACCATTCAAC GTTGATGGAT TCGGTTTTGT TTTTCCAATC GGATCACCTT TGGTGGCCGA TGTTTCAAGG GCCATCTTAA AAGTAGCAGA GTCACCAAAA GCAATGGAGC TTGAGAGCAC ATGGTTCAAG AAGAAAGAAG AAAGTTGTCC AGACCCAGTC GTTAATCCAG ATCCAAATCC GTCTACATCA TTTAGGCAAC TCGGCGTAGA TAGTTTCTGG CTTCTGTTTC TTGTTGCTTT TGTTATATGT GTTCTAACCC TTGGCAAATC ATTATTCTTT TTCCTAAAGA AGCCTACACA TGTTGATGGC TTATGGAAGG AGTTCCAAAA ACCAGACAAT GATTCGTACA TCAACAAAGT CGAGAAATGT CCATGTTCGT CAAGTCAACT CATGCCTGAG AACACCACTC CAGAAACTAA TCAAACAGCT GACGGTTGAG GCACTGTAAC CAACCATTAT GTT 
Length1493
Protein Sequence
Protein Residue
Map Locationscaffold_4: 2966233.. 2967987
Download Sequence
A.thaliana
AGI-codeAT2G24720.1
Descriptionglutamate receptor 2.2
TAIR curator summarymember of Putative ligand-gated ion channel subunit family
Alias[ATGLR2.2][GLR2.2][glutamate receptor 2.2]
Gene coexpression
MR
MR Locus Description
5.65685 Virus1179
7.93725 Ahg488573 Cysteine proteinases superfamily protein
10 Ahg916283 Defensin-like (DEFL) family protein
10.4881 Ahg936794 transposable element gene
12.8452 Ahg321472
12.8452 Ahg897389
12.8452 Ahg902931 myb domain protein 57
12.8452 Ahg936403
16.2481 Ahg908156
16.4317 Ahg916487
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression