Detail



ID : Ahg932846

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932846|scaffold_400834.1
Sequence
TTTCGAAATC GCTGCAAAAC ATGGCGGAGC CTGAAATAGA GAAGATGACA TCATCTGTAT CGAAATTGCA GCTGTCTCCA CCTCCATCAG TAAGGAAAGA GAAGACATTT TCCATGCCAG ACTGGTCTCT TCTCCCTGAA GAGTTACTCA ACCTTATCTC CTAGCATCTA GAGGATTACT GTTTTGATGT TGTCCATGCT CGCTCTGTTT GCACCTTGTG GCGATCCTTA TTTCCCTTTC CTTCTTCCCT ATTACGCCCA AGTTACTCTC TTCCATCGTT AACCAAGTTT CCTTACGAAA GCAAAGACTT GTGCACCCTC GAGAAGATCC CTTTGTTTCT CTTTAGAGTC CGAGCTCCTC ATGCTGATGC TTCTGAGTAT TTTCTGGGAG GAATAGGCCG TGATGATGAT GATCATATAG AGCTTCCATC TCCTCTTCAA TGTTCAGTGA AAGTGAAGAT CCCAGATTCT GATCCTACCT TGATTAACAT GCTTGACTGC CAAGTACTCT CTCTCGGCCA TCAGTATAGG ATGATTGGTT GCAATCCTAA ATATTACAAA GGCGTAGCTT TTCTTCCGCT AAACAAGTTT GGGGGAGGAG AAGAATTCGT TGTGCTCCTC AACTACACTA AGAATTTGTT GGTGTTAAGA AGTATTGAAA TGAGATGGAT GTTGCTTGAG ATACCCTCAT ATGGTTCATG CTCGGATTTA ATCACTTTTA GAGGCAGATT TTATGCAGCC TTTTCTAATC ATGACATCTT CGCTATCGAT CCTTACTCGC TGGAAGCAAC TCCCCTGATG CCCTCGGAGG CGCTTCTGGA CTGTGGTTCA GTAAATGATC TGGTTCCATC TGGCAATGAT GAACTTTTCC TGGTGGAGAA AATCATCCCT CGTACTGGTG TAATATACTT ATATCGGTTA ACATTAAGAG TGAGTAGGCT AGATGAGGAG GCTGGTAAAT GGGTCGAGGT TAGCGAAATA GGAGACCGTT TGTTGGTCAT TGGAAATTTA GGAAATGTCT GCTGCTCGGC TAAGGAGCTT CCTGATGGTT GTGGTTTGAC TGGGAACTCA ATTGTGTTCA CCCATGGGCG CAAAGTAACT TACTCCTACA AATATGGTGT GCATACAGGA CGTGAGGAAG ATGACCTCAA TTGTTGGAGA TACTCAAGAG ATAAATGCGT GACGATCCTC AGCACATCTC CAGTGGTGGC TCTCCGGAAG GTGAAAGATT TAGGGATTTT GAGAATGGCC AAGCAACATT TCTTCAAGCC TCTTCTTCCT GGATTCTACA GTCACTTGAT AGATGGACAG AGACTCACTG ACGGTTGGAA AGAGTTCGCT CTCTCGCATG ATCTTCTGAC ATTGTTGTTT TCAGACAAGA GAGAGATATG TGTTTCCACG TTACAATGTT GGGACCTAGT TGTTGTGAGA TTCAATATGA CTCTTCCAAT ACCTTTCACA AAGGTAAATG GCATACAAAA TGCAAAGAAG ATGAGTTTCT TGGATAAACA TGGCGTGAAA TGGTCTACGA GTCTGAGGTT GGAAAAGGAC CGTCAGAGAA TGAGATTGGT TGGAGGCTGG AAAGAGTTTT GCGATGTGAA GATAGGATAA TCGATCATGT TGGAGCTAGT TT 
Length1632
Protein Sequence
Protein Residue
Map Locationscaffold_4: 5612303.. 5617943
Download Sequence
A.thaliana
AGI-codeAT1G64840.1
DescriptionProtein of unknown function (DUF295)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.247 Ahg489425 rhomboid-like protein 11
45.5192 Ahg911192
58.3781 Ahg493006 Protein of unknown function (DUF707)
63.4508 Ahg483757 Nuclear transport factor 2 (NTF2) family protein
63.7809 Ahg950924 peptidemethionine sulfoxide reductase 1
64.1405 Ahg904035 Vacuolar protein sorting 55 (VPS55) family protein
85.3288 Ahg912113 Major facilitator superfamily protein
97.2625 Ahg919363 Nucleotide/sugar transporter family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression