Detail



ID : Ahg932971

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932971|scaffold_400959.1
Sequence
TTAAGTGTAG AGAGAAAATC ATGTCTCTAT CTCAGGTCTA TCTAGAGTGT AATAGTTGTT TGTGTTGCTT GGCTAAGACA GTGGCAGTGG CACCATTTGT GTTAAACTAC AATGGAGCAT GTTTTCGACA ATATCCTGAT TTAACTCAGA TGGAATTTAC GAACACCTTG ACTCAGTTGA TAGGATCATG GGAATGGCTT TCAAAGCATT ATAAAATCTC TCAAGGAAGC CGAAGCTCTG GTTGGAGTTT ACAGAGACGT CGAGACGAGG AAGCTAAAGG ACCGCTTGAA GCCTACACGA CTCGTATCTG CCTACCTAAT CTTTGCAAAC AAGAGGAGCA TTTTGGAGGT TGCAAAGATG AACAAAGAAG AGTGGAAGAA CTTGCGTGCG GAAGGAAGGC TCCCTTAGAA AAGGCTGAAG GCAGAAGAAG CCATGAGCCA GAAGAAGAGG ATAAAGAAGC TCTCCAAGTT CTCAAGAAAG AGAACATTGT TGCTTGCTCT GCTGATAATT CTCAGGAAAT ATACTACGAT CAACGAGAAG ATGGTGACAA GAACATTGTT ACTTGCTCTA CTGTCTTCCC TTGTGTGGAT AATATGGTGG GATTTGTTTT GCTGCCAATA CAACCAGAGG AACATTTTGG AGGTTGCGAA GATGAACGAA GAAGAGTGGA AGAACTTGTC TGCGGAACAA AAGGCTCCCT AAGAAAAGGT GGTTTTATGG AAGGATATAG AAGGCTGAAG GTAGAAGAAG CCATGCGCGA GGAGAAAAGG ATAAAGAAGC TCTCAAAATT CTCAAAAAAA AAGAAAACCA ACAATGTCAC TAAGCGTAAT AGTTGTTCGT GTTGCTTGGA TAAGACCGTG GCAATGGCAC CGTTTGTGTT GAAATACAAC CAAGCGCGTT TTCCGAAATA TCCAGGTAGA GGACACCAAG GGGATTCAAG AATTTTTGTT AATAACAGGG GTCATGATAG AGTTAAAAGT ATTACAACTT TCGGTAAAGA CATCGGAAGT CGAAACAACC TACTGTCTAC CACCAACCAT TTGGCAAAGG CTATAAATGA ACTAGATCTT GCTAATTGCG CACAATGTTC ACCAAGTTAT CAGCTCCTGC CAGATGATGA TCATGGGAAT GGCTTTCAAA GCATTATAAA ATCTCTCAAG GAAGCCGAAG CTCTGGTTGG AGTTTACAGA GACGTCGAGA CGAGGAAGCT AAAGGACCGC TTGAAGCCTA CACGACTCGT ATCTGCCTAC CTAATCTTTG CAAACAAGAG GAGCATTTTG GAGGCTGAAG GCAGAAGAAG CCATGAGCCA GAAGAAGAGG ATAAAGAAGC TCTCCAAGTT CTCAAGAAAG AGAACATTGT TGCTTGCTCT GCTGATAATT CTCAGGAAAT ATACTACGAT CAACGAGAAG ATGGTGACAA GAACATTGTT ACTTGCTCTA CTGTCTTCCC TTGTGTGGAT AATATGGTGG GATTTGTTTT GCTGCCAATA CAACCAGAGG AACATTTTGG AGGTTGCGAA GATGAACGAA GAAGAGTGGA AGAACTTGTC TGCGGAACAA AAGGCTCCCT AAGAAAAGGT GGTTATATGG AAGGATATAG AAGGCTGAAG GTAGAAGAAG CCATGCGCGA GGAGAAAAGG ATAAAGAAGC TCTCAGAATT CTCAAAAAAA AGAAAACCAA CAATGTCACT AAGACTGAAG GTCGAAGAAG CCATGAGCGA GAAGAAGAGG ATAAAGAAGC TCTCCAAATT CTCAAAAAGA GAAAACCGAG AATGTCACTA AGGTTAGTAT CTTACGCTTG AC 
Length1802
Protein Sequence
Protein Residue
Map Locationscaffold_4: 9659718.. 9670275
Download Sequence
A.thaliana
AGI-codeAT1G73060.1
DescriptionLow PSII Accumulation 3
TAIR curator summary
Alias[LPA3][Low PSII Accumulation 3]
Gene coexpression
MR
MR Locus Description
3.16228 Virus1229
13.9284 Ahg946045 Uncharacterised protein family (UPF0172)
22.8035 Virus2238
26.533 Ahg926307
27.1662 Ahg937314
31.1288 Ahg948255
34.9142 Ahg497422
35.327 Ahg333215
38.704 Ahg932497
38.7298 Ahg931687
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression