Detail



ID : Ahg933118

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933118|scaffold_401106.1
Sequence
TCATCATCTT CATCGTCTTC AATGTCATCA AACTCAGACT CATTCCCAGA TTCACTCTCC GAATCACTCC ACCACACATA CCCCCTATTC GCAAAAACAT CTCCAGATTT CTCTGACGAT GAGTTTCCAG CTGCATTCTC GCTGCTCTCC TCTTCCTTAT TAGCCAACCT GCTCATCACT GAACTACTCT TCTTGTTAAA CGGAGACGAT CTCAGCTTCC TCACTTTCTT CTCCGGGGAC ACTACCACGT CGTCATCATC GTCATCCAGA GAAATTTCTT TCGCTGTTTC AGTTGTTTCT GTTGACACAG AAAAAGAAAA GGCTAAACTT CAGGACAGGC ATTACATGCA AGCAGTTCTG TTTGATCAAT GTTTCTTTGT CAAAAATGTG ATTGTTATTA ACAGCTTACT GTTATATTAG ATCAAACCTA GAAAAACAAA 
Length440
Protein Sequence
Protein Residue
Map Locationscaffold_4: 10824154.. 10824593
Download Sequence
A.thaliana
AGI-codeAT3G23890.1
Descriptiontopoisomerase II
TAIR curator summaryEncodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues.
Alias[ATTOPII][TOPII][topoisomerase II]
Gene coexpression
MR
MR Locus Description
39.7744 Ahg486131 Transducin/WD40 repeat-like superfamily protein
49.94 Ahg929307 Tetratricopeptide repeat (TPR)-like superfamily protein
63.1427 Ahg951415 hydroxyproline-rich glycoprotein family protein
73.8715 Ahg476825
80.6226 Ahg941471 Glycoprotein membrane precursor GPI-anchored
83.7914 Ahg941620 copper transporter 5
85.4868 Ahg925616 PEBP (phosphatidylethanolamine-binding protein) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression