Detail



ID : Ahg936454

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936454|scaffold_500645.1
Sequence
TTCTTGTTAC AAAATCCTGT AGATGGATGG AGTAATTGAG CTGGTCGCTG ATGCCATATG CTCGTGTTTT GGTAGCTGCG TGGACATCTG CGTGATCACA AAGATTCACT ATATGGCACC AAACATATAT TGCTGTGGTG CAGGAACCAC TGCTGACACT GAAGCAGTAA CTGGTATTTT GTTTCTAACT TTAGTGTGGC AGATTTTGTT TTCTTGGTTA AGGACATATC AGGATCTAAT TGACTTGATG TGTCGCTCTA CAGAACTTAA CGCTTTAGTT GTCTTTGTTT TGGTCTCACT GTCCAGATAT GGTCAAAGCA TTAGAGGATG CAAAAGAATG GCAAAATGCC CAGCTTGCAC TCCCTCCAAC ACCCCAGATT GGTGTGTTGT TTCAGGTGCA TTACGAGCTG GTGTGAAGCA CTTCCTGCTA AACTCAGATT GCCTACAACT TGTTCAAGCA ATAAACTCCA CAGCTTTACT CGCAGAAGTT CATAGAGTCT TATCTGATGT ATTCCTTAGC ATTTTGAATT TTTCTACCTC GTCGTTTCTT TCCCAGATCA GCTAATGTAT TGGCTGCTAA TCTGGC 
Length586
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3319693.. 3321183
Download Sequence
A.thaliana
AGI-codeAT3G27430.2
DescriptionN-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
TAIR curator summaryEncodes 20S proteasome beta subunit PBB1 (PBB1).
Alias[PBB1]
Gene coexpression
MR
MR Locus Description
46 Ahg927449 Isocitrate/isopropylmalate dehydrogenase family protein
60.4483 Ahg919779 branched-chain amino acid transaminase 2
86.0465 Ahg482349 Calcium-binding EF-hand family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression