Detail



ID : Ahg936994

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936994|scaffold_501185.1
Sequence
TCTCTGTTGG TAGTTATTAG CCATGATTGA AGACGAATTT AGGCAGTCTT GCTTGATTTC GATAAGCGGC AGCGGCGGCG GCAAACACTA CCGCAGGTTG TTGTTCGTTT CGTCACCGCT GCCGCTGTCG CATCTGTTTC ATCACTTAGA ATTCAAGCTC ACACGAGCAA ATCGAGCACC AAGACAAAAT ACAGGTTTTC ACAAATCTGA CTTTCATTAC ACACTGTTTT TGATACACAT AAAGCTCATA AGCGAGCATA GCCCATCTAC AGTGGATGAG CTCTGATTCT TTGTATCTCT CAAGGTTCTC TGGAACTTCT CCAAGTCCAA GTGG 
Length334
Protein Sequence
Protein Residue
Map Locationscaffold_5: 9993821.. 9994910
Download Sequence
A.thaliana
AGI-codeAT3G54890.1
Descriptionphotosystem I light harvesting complex gene 1
TAIR curator summaryEncodes a component of the light harvesting complex associated with photosystem I.
Alias[LHCA1][photosystem I light harvesting complex gene 1]
Gene coexpression
MR
MR Locus Description
27.3861 Ahg951915
47.7389 Virus2949
47.8957 Ahg485059
50.7149 Ahg937312 TRAF-like family protein
74.3572 Virus3267
81.719 Ahg925799
91.1921 Ahg349957 FASCICLIN-like arabinogalactan protein 21 precursor
92.4986 Ahg359335 Ubiquitin-like superfamily protein
96.3276 Ahg912865 DNA primases;DNA primases
96.7781 Ahg944025 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression