Detail



ID : Ahg937206

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937206|scaffold_501397.1
Sequence
GACTCTCTCT TTTAGTAGAT ATGGATTGTA GACTGCATCT GGTTTTGATC TTCTCCTGTG TTTATCTGAT TTGCTTGTCA GGTCAACAAG AAAACGGGTT TGTATACAAT GGCTTCGATC AAGCTGATCT TTTTATTGAT GGGCTCGCCA AGATCCTTCC TGGTGGACTT TTGCAGTTGA CAAATGCTAC GGAGTTGAAA ATGGGTCATG CTTTTTTCAA GCAGCCATTT GGTTTTGATC CATCTTCATC CCTCTCATTC TATACACATT TTGTGTGCGC GCTGGTGCCT CCTAAGTTCG GAGCTGTGTT AGGGCACGGT ATGGCCTTTG TTGTATCTCC TTCTATGAAT TTCTCTCATG CGTTTCCAAC TCAGTACTTG GGCGTCTTCA ACAGCTCAAC AAATGTGACT TCCCCTTCTC ATCTGCTAGC TATTGAGCTT GATACTGTTC AGACAGTAGA GTTTCATGAT CTAGAAAAGG CTCATGTTGG GATTGATGTG AACAACCCGA TATCTGTTGA GTCTGCTCTC CCGTCTTACT TTTCTGACGC CTTGGGGAAG AATATAAGCA TAGATCTTCT GAGTGGGGAG CCTGTTCAGG TGTGGGTGGA TTATGATGGA TCGTTTCTAA ATGTTACACT AGCCCCTATA GAAATCCAGA AACCAAACCG GCCTCTTATA TCAAGAGCCA TCAATCTGTC AGAAATTTTT CAAGATAAGA TGTATGTTGG GTTCTCTGGA TCGAATGGGA GATTGACCAG TAACCAGTAT ATACTTGGGT GGAGTTTTAG TAAAAGCAAA GAACTTATGC AGTCTCTGGA CCTCTCTAAA CTCCCCAAGG CTCCTATTCC TAGAAATGAA CAGGCCCCCG TTCCTAGAGA GGAAAAAAAT AAATTACTTC CACTTCTTAT TGGTTTGGTC ATCTTATTGC TGATCCTTGT GCTGATGGTT CTCGGAGGAG TTTACTGGTA CAGAAGAAAG AAGTATGCAG AAGTAAGAGA ATCGTGGGAA AAGGAATACG GCCCACACCG ATATTCCTAC AAGTCTCTGT ACAAAGCAAC AAATGGGTTT GTCAAAGATG CTCTTGTTGG GAAAGGTGGG TTTGGAAAAG TTTACAAAGG AACTCTGCCT TCAGGCAAGC ATATAGCTGT GAAAAGACTA TCCCATGATG CAGAGCAAGG GATGAAACAG TTTGTGGCAG AAGTCGTAAC GATGGGAAAT TTACAACATC GCAACTTGGT TCCTCTTCTT GGGTATTGTA GAAGAAAAGG TGAGTTGCTA CTGGTCTCTG AGTACATGCC CAACGGTAGT CTTGACCAGT ACTTGTTTTG TAACCAAAAC CCATCTCTTT CATGGTTGCA AAGAATTTCT ATTCTTAAGG ACATCGCCTC GGCTCTCAAT TACCTGCATA CAGGAGCCAA TCCAGCTGTT TTGCACCGGG ATATAAAAGC TTCTAATGTC ATGTTAGATT CTGAGTATAA TGGAAGATTA GGAGATTTTG GTATGGCCAA GTTTCAGGAC CCCCAAGCGA ACCTATCTGC AACAGCTGCT GTGGGAACCA TAGGTTACAT GGCACCTGAG CTAATAAGAA CTGGAACTTC TAAAGAAACT GATGTGTATG CCTTTGGTGT TTTCCTTCAT GAAGTAACTT GTGGAAGGCG ACCTTTTGAA CCAGAGTTGC CAGCGCAAAA GAAATATCTG GTCAAGTGGG TTTGCGAATG CTGGAAACAT GCTTCTTTAC TCAAGACCAG AGATCCAAAA TTGGGAAGAG AATTCGTATC CGAAGAAGTC GAAATGGTTT TGAAACTTGG GTTGCTCTGC ACAAATGATG TTCCAGAATC AAGGCCTGAC ATGGGACAAG TGATGCAATA CCTAAGCCGG AAACAACCCT TACCGGATTT CTCACCAGAT TCTCCAGGTA TTGGGGGTTT TATGCCGGTT TCAGTGGAAG CAGCATCTAC CATTGGTATC CCAGATTCAT CAATGCATGT TAGTCACTCA ATCTTGGAAG GGTATGGAAG ATGAGATTTA AGAAACTGGG TATTCT 
Length2046
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11385648.. 11387676
Download Sequence
A.thaliana
AGI-codeAT3G45420.1
DescriptionConcanavalin A-like lectin protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.3578 Ahg483001 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
13.4164 Ahg489607 Protein of unknown function, transmembrane-40
16.2481 Ahg330218 AMP-dependent synthetase and ligase family protein
22.2711 Ahg476008 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
40.8412 Ahg354960 transferases, transferring acyl groups
56.2139 Ahg936451 Galactose oxidase/kelch repeat superfamily protein
60.0666 Ahg909351 Zinc finger C-x8-C-x5-C-x3-H type family protein
62.2575 Ahg358554
64.1405 Ahg476679 Zinc finger C-x8-C-x5-C-x3-H type family protein
73.3826 Ahg945637 DHHC-type zinc finger family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression