Detail



ID : Ahg937695

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937695|scaffold_501886.1
Sequence
TTAGTGCTTG TATAGAGAAC ATGGCGGCAG GTGAAATAAT CACTGAGCAG CCTCCAGAAA GCATAGTAGG ATTGATCGAG AAAATGGCAT ATGTGGTTGC ACTAAGGGGG CCGGAGTTTG AGAAGGAGAT GATAATCGTT AATAGGGGAG ATACAACTTT CAGCTTTATG AGTAGCTCAG ACCCTAATCA CGCTTTGTAC CAGCAAAAGC TTACTGAATA TCAAGGAGGT AAACCTCCGG ATTTCCAACC TAATACTCCA GCTACTCGTG AGCCTAAGGG CAAAGCACAA TCCTATGATC TTGAGCCTCC TCCCTCAAAG GAGCCTCGAT ATACCGAGAT CTCACGCAGG GAGAAGGAGC TTTGTACTAT TAAGCTCATT GCGCAGTTTG TGGCGCGGTA TGGGAAGCTT TTTCATGAGG ATTTGAAGCG TGTAGGTGTT ATGAGCCCTA TGTTTGACTT TATTAAGCCA ACTAATAGCA ACTTCGGTCT TTATAATAAA CTGGAGGAGG GAAGTGAGAC TGCTATGATT GATTTGTTTG ATTTTGTGGG TGGGGTTGAC TTTTTTGCTC ACATGGAAGA TGCTCACTTT TCTGCTATCC TACCACCACC TCAACCCTTT TCAATGATAA CGCACTTGTC TGATTTGCAA GCTGATGATT CAGCTATTCA TGAGTGTGTA GGCCATGCAG AAACCAGTCT TGGGCCTCCT ACTATAAGGA TCACACCCAA GGAGTTCGGT GTTATTAAGC TCACAGCGTT GTTTGTGGCG CGGTATCGGA TGCCTTTTCG TCGGGCTTTG ATGATGAGAG TGGCTATGAA CCCTCTGTTT GAGTTTATGT TCTTTCTCCC GTCTTCTCTG AAGAAAAGAC TACTGTTTAC GGACTACCCT TCTCTGACGA AGAGAGTACT GTTTACGGAC CCTTCGTTTG GGTTTGTGGA GCCAACCGAG ATCAGGTTCA ATATTTTCAA TTTGCTTGTT GATGCGTATT CCAGAGTATT ATTCCCTTGC AAAAAGCTGA AGAAGAGTGA TGCTTGTACG AGGGCCGTTG TTGATTTTTT TCTCAAACTC CTTCACTTGG AGAGGCTGGA GGAGGGAGTG GCGGCTGCTG TGATCGATTT GCATGCTTTT GTGGGTGGTG TTGACCGTTT TGCTCACCTT GATGATGAAG ATTATTCTGC TTCCATGCCA CCACCTGAAC GCCTTTCAGT GATGATGAAC CGGGTAACAC TATCTGAGCC TGATATGCTT TTGCAGCTTC CATTGGGATC TCAGCTTGCT AGTGTTCGTA AGCAATACAA ATGTGTAGGC GATATCGATT CTTTAAGGGC TCCTACTCTA AGAAGCGTAA CATTTAGAGT CCCTGGAAAG GGGATCACAC TCAAGGAGCT TGGTATTATT AAGCTCACAG CGCAGTTTGT GGTGCGGTAT GGGTATGATT TTTGGTGTGT TTTAACGGAT AGAGTGTCTA CGAACTCATT TTTTCAGTTC TTGAATCCTT TCGATAAGCA GTTCCGTTTT TACTGTGGGC TTTTACTTGC GTACACTGGA GTGCTAAAAC CTTCTAAAAA ACACAATAAG CCCCACGCTC AAACGCATCT TTACTTGAGG GGTTTTTTCA CCGACTTCAA CTGTGGAAGC ACAGGAGGGA GGGAAAAAAC TATCATTGAT AAAGCCCTTT TGCAAGCATC AGGCTTTGTT TAGCATACAG AAGGATNNNN NNN 
Length1723
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13478285.. 13480015
Download Sequence
A.thaliana
AGI-codeAT5G06520.1
DescriptionSWAP (Suppressor-of-White-APricot)/surp domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.16515 Ahg932800
10.3923 Ahg331540 plastid ribosomal protein l11
11.6619 Ahg887514 low-molecular-weight cysteine-rich 62
23.9374 Ahg915726
25.219 Ahg930412 F-box associated ubiquitination effector family protein
50.07 Ahg324441 Zinc-binding dehydrogenase family protein
58.9067 Ahg351347
66.3174 Ahg887437
70.993 Ahg357655
71.8888 Ahg948097
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression