Detail



ID : Ahg940106

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940106|scaffold_600650.1
Sequence
AGAAATAAAA AAGAGCAGTA ATGGGTGTGA TGAGATCCTC AAGAACTATG GGATTAGGGC ACTGCATGGT TTATGTTGTG GTCCTAAGTG CTATTGCGGC TACAGTGACA TCATACCCTT ACTCATCCCC TCAAACCCCA TCATACAATT CTCCCGGCCA TGAACACAAA AGCCCTAAGT ATGCGCCACA TCCAAAACCA TATGTTTACA GTTCCCCACC ACCACCGTAC TACTCTCCTT CTCCAAAGGT TTACTACAAG TCCCCACCAC CACCATACGT CTACAGCTCC CCACCCCCAC CGTATTACTC TCCTTCTCCA AAGGTTTACT ACAAGTCTCC ACCACCATAC GTCTACAGCT CCCCACCCCC ACCGTACTAC TCTCCATCTC CAAAGGTTTA CTACAAGTCC CCACCACCAC CATACGTCTA CAGCTCCCCA CCCCCACCGT ACTACTCTCC TTCTCCAAAG GTTTATTACA AGTCTCCACC ACCACCATAC GTCTACAGCT CCCCACCTCC ACCGTACTAC TCTCCTTCTC CAAAGGTTTA CTACAAGTCT CCACCACCAC CATACGTCTA TAGCTCCCCA CCCCCACCGT ATTACTCTCC ATCTCCAACC ATACGTCTAC AGCTCCCCAC CACCATATGT TTACAAGACG CCTTACTATT AATTTTGAAT GGTTTCCTTA ACAAGAAACA TGATTGCAAT CATTTTGTTT TTATGATTTT TTCTCTTGAT TTTTCTGATT TTGTTTTTGG TTCAACTATC TTGTTAAGCT TTTTTCTTAA CTAATAAAAT TTGGCTTTTT TTAA 
Length814
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2408505.. 2409320
Download Sequence
A.thaliana
AGI-codeAT5G06630.1
Descriptionproline-rich extensin-like family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg952614 transposable element gene
2.23607 Ahg323992 hydroxyproline-rich glycoprotein
2.44949 Ahg355136
3.4641 Ahg931786 proline-rich extensin-like family protein
4 Ahg905397
5.47723 Ahg355525 transposable element gene
5.47723 Ahg473807 ECA1 gametogenesis related family protein
6 Ahg347223 Proline-rich extensin-like family protein
7.34847 Ahg327089 Proline-rich extensin-like family protein
7.93725 Ahg912232 Proline-rich extensin-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression