Detail


ID : Ahg323992

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|323992|fgenesh1_pm.C_scaffold_5001536
Sequence
ATGGTTGCTG CATATGAGCC AGAAACATAT AGCTCCCCAC CACCATTGTA TTCTTCGCCG CTTCCTAAAG TTGAATACGA GACTCCTCCA CTACCATCAG TCTACAGTTC TCCACCACCA CCTTATTATT CACCGTCTCC TAAAGTTGAC TACAAGTCTC CTCCACCACC GTATGTTTAC AGTTCGCCAC CCCCACCAAC CTACTCACCC TCTCCAGTAG AATACAAGTC TCCTCCACCA CCGTACGTAT ACAGTTCTCC ACCACCACCA TACTACTCCC CTTCGCCAAA GGTAGACTAC AAATCTCCTC CACCACCATA TGTCTACAGT TCCCCACCAC CACCATACTA CTCGCCTTCC CCTAAGGTAG ACTACAAGTC TCCTCCACCA CCATACGTCT ACAGTTCTCC ACCACCACCA TACTACTCGC CTTCCCCTAA GGTTGACTAC AAGTCTCCAC CACCACCGTA CGTCTACAGT TCTCCACCAC CACCATATTA TTCACCTTCC CCTAAGGTAT ACTATAAATC TCCACCACCA CCGCTAGCCG TCTACAGTTC TCCACCACCA CCGTACTACT CTCCTTCACC TAAAGTGTAC TATAAGTCTC CACCACCACC ATATGTGTAC AGCTCTCCAC CACCACCATA CTACTCACCT TCTCCTAAGG TATACTACAA GTCTCCACCA CCACCATACT ACTCACCTTC GCCTAAGGTG TATTACAAGT CTCCACCACC ACCGTATGTC TACAGCTCTC CACCACCACC ATACTACTCA CCTTCGCCTA AGGTGTACTA CAAATCTCCA CCATCATACT ACTCACCTTC TCCTAAGGTG TACTACAAAT CTCCACCACA TCCTCATGTA TGTGTTTGTC CACCACCTCC TCCATGTTAT TCTCCATCCC CTAAGGTTGT GTACAAGTCT CCTCCACCAC CATACGTCTA TAGTTCTCCA CCACCACCAT ACTATTCACC ATCCCCAAAA GTGTACTATA AATCTCCTCC ACCACCATAT GTTGAATACA AATCTCTCCC ACCTCCATAT GTTTACAAAT CTCCACCTCC ACCATCGTAT TCACCTTCTC CAAAAACTGA GTACTAA
Length1107
Protein Sequence
Protein Residue
Map Locationscaffold_5: 4401707.. 4433223
Download Sequence
A.thaliana
AGI-codeAT3G54590.1
Descriptionhydroxyproline-rich glycoprotein
TAIR curator summaryEncodes a hydroxyproline-rich glycoprotein.
Alias[ATHRGP1][HRGP1][hydroxyproline-rich glycoprotein]
Gene coexpression
MR
MR Locus Description
1 Ahg347223 Proline-rich extensin-like family protein
1.41421 Ahg355525 transposable element gene
1.73205 Ahg912232 Proline-rich extensin-like family protein
2.23607 Ahg940106 proline-rich extensin-like family protein
2.44949 Ahg916456 proline-rich extensin-like family protein
2.64575 Ahg905690
2.82843 Ahg931786 proline-rich extensin-like family protein
3.74166 Ahg921634 Proline-rich extensin-like family protein
3.87298 Ahg347221 hydroxyproline-rich glycoprotein
4 Ahg949376 transposable element gene
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression