Detail



ID : Ahg940340

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940340|scaffold_600884.1
Sequence
GCTTTGGAGA CGATACCGAT ATGGAATCTG TGAACAATTT GACCACAAGT GCGGAGGGTG TTTTAGCCGT AGCTTCTACC ACTTATTCCT TGAAAGTACT GGTCGACTTC TTGACATCCC CCGAGGTGAA TATACCCGTA AGAGCTCTGG ACTTAGGAAC TATCACCCCA GTGGAGATCA GGAAGGCCTT TAAAATCAGT GATGGGAAAC GGCAGTTTTC CACTATCTTG GCGTTTGGAG TGGACGTGAC ACATGAGGCG TCTCGTCTGG CAGCACGATT GCAAGTCAAA GTAATCCGTG GCAGTGTGCT TGAAACCCTG TGCCAACTAT TCAAAGACCA TATCAGACGG CTGGGAGAGG AGACTGAAAT GGATGATGAA GCAATCTTCC CATGCGTCCT CCGCATCTTA CCCAACTGTG TGTTTAACAA GGACGACCCA GTTGTCCTCG GAGTTTTAGT TGTTTATGGT TTCATTAAGG TCGGAACTCC CATTTGCAAT CTGCGAAGTG GTTGCCTGGA TATAGGACGT ATTGCATGGA TTGAGAAGGA CCACCGATCC GTCAACGCTG CTAGGTTAGG CGACACGGTG ATGATCAAGA TTGTTGCATC AAACCCAGAA GAACGAGGAC TTAGCTTTGG AAGCCATTTT GACATTAGTG ATGATATCCT TGTCAGTCAC GTTTCTAGGA AATCTATTAA TGTGCTCAAA TCTCGTTACA GGGAGGTTGA TGGTAAGGAC TCTGTGGAAT GGGTATCAAA CTGGAAACCA AATGTCACAA TTAACCTAGT CACTCGGATG AATCTTTTCA CTATTTCAGC CGTTGCAACT TACTTGCCAA AGCGAAAAGC AGATAAGAAG AAGAGTTTGT TGGGAAATCC CAAAGACTCT GATGAATCCA AAGTTGAAGT TGAGGAGGTT GATGGTAAGG ACTCGGATCT CAAGGATGAG GGCCATGTGG AATGGGTATC CTACTGGAAA CCAAATGTCA CAAATAACCT AGTCGATGAC TTTACTCGGG ACAAGTTGAT TTTAATCAAT GAGACGGTCT CAGAGCTGCC ACTTAATCTG GAAGTAAGCC CCATAAGCAT GACAAAGTGG CAGCTGTTTC AGCAGATTGA TCAGTCTTTC CAGATTCACC GTAGCTATGG AAGCATGCTT GATGGTGAAT CTGACGAACT AAAGGGTGTT TTTGGAAGGA AATCCCTATC TGTTGGGCGT CACAATGTTG TTTCGATGCT TCATTCTGTA TTTGACTTCC TTGCATTCAA AAATGCTATT GAATTACCCG TGACATTCCC TGCAGATATC CAGTTTTGGA ACAAGAACAA ATCTATGGAA GGACTGTCTG CGAAGTCTGT CGTACTGAAT TTTATCTGTC AGTTTATCAT CTTCCTCTAC CTGCTTGACA ACGACACTTC GTGGATGATA CTGGCTAGCT CTGGAGTTGG TGTCTGCATC GAGTTCTGGA AAATAGGGAA AGCCATGCGG ATTGAGACCA AGGAGTATGA CGACATCGCC ATTAAATTCT TATCCTATGC GCTCCTCCTC CTTGTTGTGG GTTTCTCCAT ATATTCACTT GCCTATGAAC GCCACAAGAG TTTCATAATG ATGTGTCCTC AATTGTTCAT CAACTATAAG CTGAAGTCAG TAGCACATTT ACCATGGAGG CAAATGACAT ATAAGTTCCT CAACACAATC ATCGACGATC TCTTTGCTTT TGTCATCAAA ATGCCAATGC TGCATCGCCT TTCTGTCTTC CGAGATGATG TGATATTCTT AATATACTTG TACCAGAGAT GGGTTTATCC TGTGGACAAA ACACGTGTCA ACGAGTTTGG TTTTGGAGGT GAGGATGAGT CTGTGGATAC AAAGAAGATC TCTGACCAAG AAGATGACAA GAAAACAAAC TAATTAGCTT TGTGCTTTTG TTC 
Length1933
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3227169.. 3324720
Download Sequence
A.thaliana
AGI-codeAT5G08500.1
DescriptionTransmembrane CLPTM1 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
22.2711 Ahg489244 amino acid permease 7
60.7618 Ahg490208 transposable element gene
63.5925 Ahg936232 Protein of unknown function (DUF626)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression