Detail


ID : Ahg941228

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941228|scaffold_601772.1
Sequence
TCTCTCACTC TCTCAAGAAC TTGAGTATGT CTTCTTCTGT AGCAGTGTTA TGGGTTGCTA CTTCTTCTCT GAATCCTGAC CCAATGAACA ATTGTGGGTT GGTAAGAGTT CTAGAATCTT CTAGAATGTT CTCTCCTCTT CAGAATCAGA GACTAAACAA AGGTAGGTGG AAGCAGACAC CAACTTGGAG TTCTTCTGTA ATGAACCCAA GTAGAAGAAG TGGTGTTGTG TCTTCAAGTT TAGTAGCAAG TCCTTCAGGA GAGATAGCCC TCTCATCAGA AGAGAAGGTT TACAATGTTG TGCTGAAACA AGCTGCTTTG GTGAACAAAC AGCTAAGGTC TTCTTCTTAT GATCTTGATG TGAAGAAACC ACAAGATGTT GTTCTTCCAG GGAGTTTGAG TTTGTTGGGT GAAGCTTATG ATCGATGCGG CGAAGTTTGC GCTGAATATG CTAAAACGTT TTATCTCGGA ACTTTGCTTA TGACACCCGA AAGGCGAAAG GCGATTTGGG CTATCTACGT TTGGTGTAGA AGAACTGATG AACTCGTCGA TGGGCCTAAT GCTTCACATA TAACTCCCAT GGCTTTAGAT AGATGGGAAG CAAGGTTAGA AGATCTTTTC CGTGGCCGTC CTTTCGATAT GCTAGATGCT GCTCTTGCTG ATACAGTTGC TAGATACCCG GTCGATATTC AGCCATTTCG AGACATGATC GAAGGAATGA GAATGGACTT GAGGAAATCG AGATACCAGA ACTTCGATGA TCTATACCTT TACTGCTACT ATGTCGCTGG AACCGTCGGA TTGATGAGCG TTCCGGTTAT GGGAATCGAT CCTAAGTCGA AAGCAACAAC CGAAAGTGTT TACAACGCTG CCTTGGCCCT TGGTATAGCC AATCAGCTTA CCAACATACT CAGAGACGTT GGCGAAGATG CGAGAAGAGG AAGGGTTTAT CTGCCTCAGG ATGAATTGGC TCAAGCTGGT CTTTCAGATG AAGACATATT CGCCGGAAAA GTCACTGATA AATGGAGAAA CTTCATGAAA ATGCAGCTTA AGCGAGCAAG AATGTTCTTC GATGAAGCTG AGAAAGGCGT CACCGAGCTC AGCGCCGCTA GCAGATGGCC AGTATGGGCA TCGTTGCTAT TGTACAGGAG AATATTGGAC GAGATTGAAG CGAACGATTA CAACAATTTC ACTAAGAGAG CTTATGTGGG GAAAGTCAAG AAAATTGCAG CTTTGCCATT GGCGTATGCT AAATCAGTGC TAAAGACTTC AAGCTCAAGA TTATCAATAT GATCGAGAGG AAAGTGGAAC AA
Length1312
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6750857.. 6753114
Download Sequence
A.thaliana
AGI-codeAT5G17230.3
DescriptionPHYTOENE SYNTHASE
TAIR curator summaryEncodes phytoene synthase.
Alias[PSY][PHYTOENE SYNTHASE]
Gene coexpression
MR
MR Locus Description
2 Ahg944970 P450 reductase 2
2.82843 Ahg935146 phosphoenolpyruvate carboxylase 2
8.12404 Ahg496704 general control non-repressible 5
8.7178 Ahg472123 Homeodomain-like superfamily protein
9.59166 Ahg483787 SPA (suppressor of phyA-105) protein family
10.3923 Ahg492115 mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase
10.3923 Ahg479227 CBL-interacting protein kinase 1
12.2474 Ahg937481 phosphate starvation-induced gene 3
12.49 Ahg481465 glycine decarboxylase P-protein 2
13.8564 Ahg476191 transporter associated with antigen processing protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression