Detail



ID : Ahg941401

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941401|scaffold_601945.1
Sequence
ATTGTTCTTT TTGTTTGATG ATGGATACCA CTTCAAACGA GCTTCCTAGA AGGAAAGCTG ATTCAGAGAC TTTGATGAAA GGAACTTCTT CTGACGGTGA TATACCATTT TCTTCAGCTT GTGCTGTGAT TGTTGGTGAG AAGAGAAAGA TGAACGAATA TGGTGGAAGT AGTAATACTG GAAATCGCGG TGTTGTACAT ACCAATAGAA GAGGGTCAAA TGATGATGGA GATACAGAAA GGGGAGAAGA GTCGGTACAA ATACAACCAA AGATTTCTGA ATTTGTTGGT CCCAAGTTTA ATGACTTTGG TAATCTGAGG GAAGAAGTTA ACTTTGCGGT TGGCCAGACC TGGGCTCTTT ATGATACAAC AGATGGGATG CCTAGATTGT ATGCTCAGAT CAGAAAAGTT TCAGCTCCTT CTTTCGGGCT TAGGATCACA TATCTAGAGC CAGATCCTGA TGATGAGAAA GAGCTCCAGT GGTTTGAAGA AGACTTGCCT GTTTCTGTTG GTAAGTTCAG GCTTGGCCAA AGTCAGAACA CGAAAGATCG TTCCAGATTC TCTCATCTTA TCCAATGCAA TGAAGGAAGC AACACAAGTC GTCTCACTGT TTTCCCAAGA AAAGGTGAGA CGTGGGCTCT GTTCAAGAAC TGGGACATTA ACTGGTCTTC AGAGCCAGAT TCTCACCGCA AATTTGAGTA TGAGTTTGTT GAGATTTTGT CAGATTACGC TGATGGAACT GGTGTATCTC TTGCATTCTT GCATAAAGCA AAAGGGTTTG CAAGTGTCTT CTTTCGGATG GGAACTGGTG ATGCAGAAAT ATCTCGAATT CCGCCTCATG GTTTATATCG GTTCTCCCAC AGGATTCCTT CCTTCAAACT GACTGGAATT GAAGGAAAAG GTTTGCCAAA AGACGCATAC GAGCTGGACC AAGTTGTATT ACCTGAAACT ATCAAAGAGA TAATTGTCCC TTTTTATCTA TTAGCAGTGC GTACCGCTTT GAAGTCTAAA CCAGAAGCTC TCTGCTTTGC TAATAAGGGA AAGGTTTTTA AAACTGGGCA GATTTGGTCT TATTATAGGC TATACAAACG CTTCCCTCGG TACTACGGTA GAATTGAAAA GATCACTTTA ACTCAGGCAT TCGAGCAGGA TGCAGTATGT ACACTACACA TAAGTCGGTT AAAGGCCACT CCTTTCCCTG AGGATGTCGT CAAGTGGGAT GACAATAGAA TGCCTGTTGG TTGTGGAACT TTCTTGGTGA TGAAAGGTAT CGAAAGACTC ACGCCTTATG AGGTTTCACA TCAGATAGTG CCTCAAACCT CCATGGATGG AAAGGAATAT ACCATTCTTC CCAAGATTGG CGATCTTTGG GCCATATACA GATCCTGGTC TCCTCACTTT GAAGTTGATG GCTTGGAAAG ATGGTATGAC TATGACGTTG TGGAAGTTCT TGATGACACC TTGGACTATA AGGTTTTAAC GTTGGAGCCT GTGTCGGTCT CTAATGAAGA TGATGAAAAA ACATTCTTTA GAGCAGCTGA GAGTAGTGAC TGCGAAGTGG TATTTACGAT CCGAAAGTCG AAAAGGCTCA AATTCTCGCA TCAGCTTCAT GCTTCCCGAG TAACCAAGGT GATAGATGGA GATTTGAAAG AGCTTTTTGA AGTTGATACT AGAGCTATTA CTTCAATGAT CTTCTCTTCA TACCTTAGAA GTGAGGGTTT GTTTCCCCGA AAAAAGAAGA AGACGTGAGG GTTTGAAGAC CCTTGAGC 
Length1768
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7456414.. 7472355
Download Sequence
A.thaliana
AGI-codeAT5G18740.1
DescriptionDomain of unknown function (DUF3444)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg951982 RNA-binding (RRM/RBD/RNP motifs) family protein
2 Ahg933851
3.87298 Ahg933574
4.89898 Ahg338521
5.2915 Ahg932215
7.4162 Ahg943123 RING/U-box superfamily protein
8.12404 Virus2014
8.94427 Ahg916019
9.94987 Ahg947282
12.9615 Ahg947828
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression