| Annotation |
|---|
| Description | jgi|Araly1|941820|scaffold_602364.1 |
| Sequence |
TCTCCTACGT ACTCTATAGT AATGGTTTCG TTTCTTCTCA CATCTTCCAG TATGATAACC ACCACATGTC CCTCCATGGT TCTCCGGTCA GGGTTACCCA TTGGATCTTC CCTTTCCTCT CTTCGCCTGA CCCGTCCATA CAACAAGGCG ACTTTGTTCA CCTCATGTTA CTCTTCTGAG TCCAAAAAGG TGGCAAGTAG TGCTGATCTC AAACCTGCCG TGGAACGGAG GCCAGAGTAC ATACCGAACA AGCTTCCTCA CAAGAACTAT GTTCGTGTAT TAGACACGAC GCTCCGTGAT GGTGAACAAT CTCCCGGTGC AGCACTTATC CCACCGCAGA AGCTAGAGAT TGCCCGACAG CTTGCTAAAC TCCGAGTTGA CATCATGGAA GTTGGTTTTC CGGTGTCGTC TGAGGAAGAG TTCGAAGCCA TTAAAACCAT CGCCAAGACC GTGGGGAACG AGGTGGATGA GGAAACAGGT TACGTCCCTG TGATATGCGG CATTGCCCGA TGCAAAAATA GAGACATTGA GGCGGCTTGG GAGGCACTGA AGTATGCGAA GAGGCCCAGG GTAATACTAT TCACATCTAC TAGTGACATT CACATGAAAT ATAAGTTGAA AAAGACTAAA GAAGAAGTGA TCGAGATGGC CGTGAACAGT GTTAAGTACG CTAAAAGCTT GGGCTTCAAA GACATCCAAT TTGGGTGCGA AGATGGCGGC AGGACGGAGA AGGATTTTCT ATGTAAGATT CTAGGAGAAA CGATTAAAGC GGGTGCAACC ACGGTGGGCT TTGCGGACAC GGTCGGGATC AACATGCCGC CAGAATTCGG AGAACTCGTG GCCTATGTCA AAGAAAACAC TCCTGGAGCT GATGATATTG TCGTCGCCAT TCATTGCCAC AACGACCTTG GTGTTGCTAC CGCCAACACA ATATCCGGTA TATGTGGGGG AGCAAGACAA GTAGAAGTAA CGATCAACGG AATTGGTGAA AGAAGTGGGA ATGCGCCGCT TGAAGAGGTC GTGATGGCTT TGAAATGTCG AGGAGAATAT CTTATGGATG GTGTTTACAC AAAAATAGAC ACACGCCAAA TTATGGCTAC AAGCAAGATG GTTCAAGAGC ATACCGGCAT GTATGTTCAA CCACATAAGC CAATAGTTGG AGACAACTGT TTTGTTCATG AGAGCGGCAT TCACCAGGAT GGAATATTGA AAAATCGAAG TACATATGAG ATTTTATCAC CAGAAGATGT TGGGATCGTA AAATCTGAAA ATTCTGGCAT TGTTCTTGGA AAGCTTAGTG GACGTCATGC TGTAAAAGAC CGGCTTAAAG AGTTGGGATA TGAAATCAGT GATGAGAAAT TCAACGACAT CTTCTCACGA TACAGAGAAT TAACCAAGGA GAAAAAGAGA ATCACGGACG ATGATCTGAA AGCATTAGTG GTGAACGGTG ATGAAATCTC ATCAGATAAA TTAAACAGTA AAGGAATCAA CAACCTTTTG TCAAGCCCTC AGATTTCCGC TGTTGTATAA GTTTGTAAAG ACATTTGTGT A |
| Length | 1551 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 9263707.. 9266941 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G23020.1 |
| Description | 2-isopropylmalate synthase 2 |
| TAIR curator summary | methylthioalkymalate synthase-like. Also known as 2-isopropylmalate synthase (IMS2). encodes a methylthioalkylmalate synthase involved in the biosynthesis of aliphatic glucosinolates which accepts all the omega-methylthio-2-oxoalkanoic acids needed to form the known C3 to C8 glucosinolates in Arabidopsis. |
| Alias | [IMS2][MAM-L][MAM3][2-isopropylmalate synthase 2][METHYLTHIOALKYMALATE SYNTHASE-LIKE] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg312617 | cytochrome P450, family 79, subfamily F, polypeptide 2 |
| 1.41421 |
Ahg929873 | branched-chain aminotransferase4 |
| 2.44949 |
Ahg927551 | aspartate kinase 3 |
| 2.44949 |
Ahg493537 | cytochrome P450, family 83, subfamily A, polypeptide 1 |
| 2.82843 |
Ahg326599 | 2-isopropylmalate synthase 2 |
| 3 |
Ahg938383 | Class I glutamine amidotransferase-like superfamily protein |
| 3.16228 |
Ahg488253 | isopropylmalate dehydrogenase 1 |
| 3.74166 |
Ahg920545 | cytochrome p450 79f1 |
| 5.65685 |
Ahg941819 | methylthioalkylmalate synthase 1 |
| 6.48074 |
Ahg915044 | isopropyl malate isomerase large subunit 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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