Detail



ID : Ahg942798

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|942798|scaffold_603342.1
Sequence
TTTTGTATGG CAGAATTATA ATGGAGATGA TGTCAATGTT GATAATCTAT TTGTTATTCA TCGGTGGAGA CAAAACTGCT ATCAAAAGTG AAAGTGGCAA TGTTATGGAT AGCGGTCCCA ATGATCGTAT CTTCATATTT TACATTGACC ATGGTGGTCT AGGAGTTCTT GGTGAGTTCA ATAAAACCAA GTGAGAATGT TGTGGATAGT GGAT 
Length214
Protein Sequence
Protein Residue
Map Locationscaffold_6: 18901913.. 18902126
Download Sequence
A.thaliana
AGI-codeAT4G32940.1
Descriptiongamma vacuolar processing enzyme
TAIR curator summaryEncodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.
Alias[GAMMA-VPE][GAMMAVPE][gamma vacuolar processing enzyme]
Gene coexpression
MR
MR Locus Description
8.7178 Ahg471403 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
10.8628 Ahg474323 Mannose-binding lectin superfamily protein
13.3417 Ahg932572
13.3417 Virus0382
13.3417 Ahg947325
13.3417 Virus0804
13.3417 Ahg887942 C2 domain-containing protein
19.4422 Ahg932789
19.4936 Ahg473504 NAC domain containing protein 15
22.0907 Ahg495285 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression