| Annotation |
|---|
| Description | jgi|Araly1|943770|scaffold_604314.1 |
| Sequence |
TGTTTTGCTA CGAGTGGGAA TTCATGGGGA AAGGATCAGA AGACCTTGTG GAGAAGGAAA GCTTAAATTC TACACCCGTA AATTCGGATA CGTTTCCTGC TTGGGCTACA TCGTCTGTCT CACAGACAGG TTCTTCTGGA GATGCAAAAG TTGGTCCCAA TCTGAGCAAA ATTTTCGGAG GTGATTTGTT GGAAAAATTT TCGGTCGACA AATCAACTTA TTGTCATGCT CAGATCAGAG CCACTTTCTA TCCAAAATTT GAGAACGAAA AAACTGACCA AGAGATAAGA ACAAGAATGA TTGAGATGGT TACTAAAGGA TTGGCAACAC TGGAGGTTTC TCTTAAGCAT TCAGGCTCTC TCTTTATGTA CGCCGGTCAC AAGGGGGGAG CATATGCAAA GAACAGTTTT GGTAATATTT ATACTGCCGT TGGTGTTTTT GTTCTTTCAC GGATGTTCAG AGAGGCTTGG GGAACTAAGT CTCTAGAGAA AGAAGCAGAG TTCAATGATT TTCTTGAGAA AAATCGCATG TGCATATCTA TGGAACTGGT AACAGCTGTT CTTGGAGATC ATGGTCAACG CCCACTGGAT GATTATGTGG TAGTGACGGC CGTTACCGAG TTAGGTAATG GTAAGCCCAA GTTCTATTCA ACTTCCGGAA TAATTGCATT TTGTCGGAAA TGGCGTCTAC CAACAAATCA TGTTTGGCTG TTTTCCACAA GGAAATCAGT GACCTCTTTT TTCGCCGCAT TTGATGCACT CTGTGAAGAA GGGATAGCAA CCTCGGTCTG TAGGGCTCTT GATGAAGTAG CTGATATATC AGTCCCAGCC TCAAAGGACC ATGTTAAGGT CCAGGGTGAG ATATTAGAGG GTCTTGTAGC GCGTATCGTG AGCAGTCAGA GCGCAAGAGA TATGGAAAAT GTCTTGAGAG ATCATCCTCC ACCACCCTGT GATGGAGCTA ATCTTGATCT GGGACTCAGT CTAAGAGAGA TATGTGCTGC TCATAGATCT AACGAGAAAC AGCAAATGAG AGCACTTTTA AGGAGTGTTG GGCCAAGCTT TTGCCCTAGT GACGTGGATT GGTTTGGAGA TGAATCTCAT CCGAAAAATG CTGACAAATC TGTTATAACA AAATTCCTGC AATCTCAGCC TACTGATTAT TCAACTAGTA AATTACAGGA AATGGTATGC TTGATGAAGG AAAAACGTCT TCCAGCCGCA TTCAAATGTT ACCATAATTT TCATAGAGCT GACGACATAT CACCTGATAA CCTATTTTAT AAATTGGTTG TTCATGTGCA CAGCGATTTA GGATTTAGGC GTTACCAAAA AGAGATGAGG CACATGCCTA GTTTGTGGCC TTTATATCGA GGTTTCTTTG TTGATATTAA TTTGTTCAAG TCAAACAAAG GGAGGGATCT GATGGCTCTG AAAAGCATTG ATAATGCGGT CAAAGATGCC AGTGAAAATG ATGGTCAACG AGAAAAGGAT GGTTTGGCTG ATGGTGATGC TAACTTAATG ATCAAATTAA AGTTTCTCAC ATACAAATTG AGAACCTTTT TGATCCGTAA TGGCCTATCA ATTCTATTTA AAGAAGGGCC AGCAGCTTAC AAAACCTACT ATCTTAGACA AATGAAAATC TGGGGTACGT CAGATGGAAA GCAGAAAGAA CTTACCAAGA TGCTTGATGA ATGGGCTGCT TACATAAGAA GAAAGTGTGG GAATGATCAG CTATCTTCAT CAACATACTT AAGTGAAGCT GAGCCATTCT TGGAGCAGTA CGCGAAGCGG AGCCCAATGA ATCAGATTTT GATAGGGGCT GCTGGGAACC TAGTTAGAAC TGAGGACTTC TTGGCCATTG TGGACGGTGA TCTAGATGAA GAAGGCGATC TTGTGAAGAA AGAAGGAGTG ACACCAGCTA CTCCTGAGCC AGCTGTGAAG GAAGCTGTCC AAAAGGATGA GGGGTTAATT GTATTCTTTC CAGGGATTCC TGGATGTGCT AAATCTGCAC TTTGCAAGGA GTTATTGAAC GCCCCAGGAG GCTTTGGAGA TGATAGGCCA GTGCATACTC TGATGGGTGA TCTTGTCAAA GGAAAATATT GGCCAAAGGT TGCTGATGAA CGTCGTAAAA AACCACAATC GATTATGTTG GCTGACAAAA ATGCTCCAAA TGAAGATGTC TGGAGACAGA TTGAAGACAT GTGTCGAAGA ACTAGGGCTT CTGCAGTTCC AATCGTTGCT GATTCTGAAG GAACCGATAC AAATCCATAT TCACTTGATG CCTTGGCTGT ATTCATGTTC CGGGTACTTC AACGAGTTAA CCATCCGGGA AAGCTCGACA AGGAATCTTC AAATGCAGGC TATGTGCTAT TGATGTTTTA TCACCTTTAT GAGGGAAAGA ACCGCAATGA ATTTGAGAGT GAATTGATTG AGCGCTTTGG CTCCCTAATC AAGATGCCAC TATTGAAATC AGACAGGACT CCTTTACCTG ATCCTGTTAA ATCAGTTCTT GAGGAGGGCA TAAATTTGTT CAATCTCCAC AGCAGAAGAC ATGGGAGACT CGAGTCGACA AAAGGAACAT ATGCAGCAGA ATGGACCAAA TGGGAGAAAC AACTACGAGA TACTTTAGTT GCGAATTCTG AGTATCTCAA TTCTATTCAG GTTCCATTTG AGTCTGTGGT TCATCTAGTG CGAGAAGAGC TAAAAAAAAT CGCAAAGGGT GAATACAAGC CACCAAGTTC AGAGAAAACA AAACATGGGT CTATTGTTTT CGCTGCCATC AACTTGCCTG CTACTCAAGT TCACAGTCTT CTTGAAAAGT TAGCCGCAGC AAACCCAACA ATGAGATTTT TTCTAGAGGG CAAGAAAAAG ACCATACAGG AAAAACTTGA ACGGTCTCAT GTGACGCTTG CCCACAAGAG AAGCCATGGC GTAGCAGCTG TAGCCAGCTA TGGTCAGCAC TTGAACAGAG AGATACCCGT AGAGCTCACG GAGCTCATCT ACAACGACAA GATGGCAGCT CTAACTGCCA ATGTCGGATG TGTGGACGGA GAGACGGTAG TCTCCAAGAA CGAATGGCCA CATGTTACGT TGTGGACTGG AGAAGGCGTA ACTGCGAAAG AGGCCAACAC GTTACCTCAG CTTTACTTAG AAGGGAAGGC GAGCCGCTTA GTGATAGATC CTCCGGTCTC AATCTCAGGT CCTCTGGAAT TTTTCTGAAT ACTTATGAAA CATGGAAG |
| Length | 3238 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 23514468.. 23522351 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G07910.1 |
| Description | RNAligase |
| TAIR curator summary | Encodes a tRNA ligase that resembles the yeast Trl1 RNA ligase in structure and function but very different in sequence. Like Trl1, AtRNL consists of two domains — an N-terminal ligase component and a C-terminal 5'-kinase/2',3'-cyclic phosphodiesterase (CPD) component— that can function in tRNA splicing in vivo when expressed as separate polypeptides. Requires a 2'-PO4 end for tRNA splicing in vivo. |
| Alias | [AtRLG1][ATRNL][RNL][AtRLG1][ARABIDOPSIS THALIANA RNA LIGASE][RNAligase] |
| Gene coexpression |
|---|
| MR |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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