Detail



ID : Ahg947784

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947784|scaffold_704013.1
Sequence
TGAGTTTTCT CTGCCGGCCG CCATGGAAGT AGTGGGAGAA GGGAAGGAGT TCTCTTTTCC TCGGGAGGAA GAGAAAGTCC TCTCATTCTG GAATCAAATC GATGCCTTCA AGACGCAGCT CAAACGAACA GAGCATCTCC CCGAATACAT TTTCTACGAC GGGCCTCCTT TCGCCACCGG TCTTCCTCAC TACGGCCACA TCCTCGCCGG CACCATCAAG GACATCGTAA CTCGCTACCA GACCATGACT GGTCACCACG TCACGCGTCG CTTCGGGTGG GACTGTCACG GCCTCCCGGT TGAGCAACTG ATTGAAAAGA AGCTCGGTAT TGAGAGGAGA GCACAAGTGC TTCAGATGGG GATTGATAAG TATAACGAAG AGTGTAGGAG TGTTGTGACT CGGTATGTGG AGGAGTGGGA GAAGGTGATT ACTAGAAGTG GTCGTTGGAT TGATTTCAAG AACGACTATA AGACGATGGA TCTGCCTTTT ATGGAAAGTG TTTGGTGGGT TTTTGCTCAG CTTTTTGATA AGAATCTTGT CTACAAAGGC TTCAAGGTTA TGCCTTATAG TACTGGTCTC AAGACACAAT TATCTAATTC AGAAGCTGGT TTGAACTACA AGGACGTTTC AGATCCTGAG ATTATGGTGA CGTTCCCAGT TATTGGCGAT CAAGATAATG CTGCTTTTGT GGCTTGGACT ACTACTCCAT GGACTCTTCC TAGCAATCTT GCTTTGTGTG TCAATCCCAA TTTTGTTTAT CTCAAGGTTC GTAACAAGCA CAATGGGAGA GTCTACGTGG TTGCTGAATC TCGCCTCTCA GCCCTTCCCG CTGATACCAA GAAATCAAAT CCTAAACCCA AAGGTGGTGA TAGTGCAGCT GATTCTTATC AAGTTTTGGA GAAATTTGAT GGAGCTTCCC TGGTTGGGAA GAAGTATGAA CCTTTGTTTG ACTACTTTAG TGATTTCTCA TGTGTGGCCT TTCGAGTAGT AGCAGATGAT TATGTCACTG ATGACAGTGG TACTGGCATC GTCCACTGTG CTCCTGCCTT TGGTGAAGAC GATTACCGTG TTTGTCTTGA GAACAAGATC GTTGAACAGG GTGAAAATCT AGTTGTGGCT GTTGATGAGG ATGGGCTTTT TACTGAGAGA ATTACCCATT TCTTTGGCCG GTATGTCAAA GATGCCGACA AGGATATAAT TGAAGCTGTG AAGACCAAAG GCAGACTTGT CAAAACTGGG AGCTTTACTC ACTCATATCC GTTTTGCTAT CGATCAGACA CTCCTCTCAT ATATAGAGCC CTTCCCTGTT GGTTTGTCCG GGTGGAGGAC CAGTTGAAGG AACAGTTGTT AGAAAACAAT GAACAGACAT ACTGGGTACC TGATCATGTG AAGGATAAAC GCTTTCACAA TTGGCTTGAA AATGCAAGGG ATTGGTGCAT TAGCCGAAGT AGATTTTGGG GCACGCCTCT ACCAATATGG ATCAGTGATG ATGGTGAGGA AGTTGTTGTC ATGGATTCTG TCGAGAAGCT TGAAAAGCTC TCTGGTGTCA AGGTCTTTGA TCTACATCGT CACCATATTG ATCAAATTAC AATCCCATCT AGTCGTGGGC CTGAGTTTGG TGTGCTCCGT CGTGTAGAAG ACGTTTTTGA TTGTTGGTTT GAGAGTGGGT CAATGCCTTA TGCGTACATC CATTATCCTT TTGAAAACAA GGAGCTTTTT GAGAGTAACT TCCCTGGTCA TTTTGTGGCT GAAGGGCTTG ATCAAACTCG TGGATGGTTT TATACTCTTA TGGTGCTGTC GACTGCATTA TTTGGAAAGC CAGCATTTCG AAATCTGATT TGCAATGGTC TTGTGCTTGC TGAGGATGGA AAAAAGATGA GTAAGAGTTT AGATAATTAT CCGCCTCCTC TGGAAGTCAT AGATGAGTAC GGAGCTGATG CTGTGCGATT GTACCTCATC AATTCTCCGA TCGTACGCGC CGAGCCACTA CGCTTCAGAA AGGAAGGAGT ACTTGGTGTT GTCAAAGATG TATTTCTTCC ATGGTACAAT GCATACAGAT TCCTTGTTCA GAATGCAAAG AGACTTGAGA TTGAGGTTTC TGGACCATTT GTTCCTACTG ATCTAGCTAC TTTACGGTCA TCAAACGTTC TCGATCAGTG GATTTACTCA GCTACCCAGA GTCTTGTTTG TTTTGTCCGT CAGGAGATGG ATGGTTACCG GCTTTATACT GTTGTTCCGT ATCTTTTGAA GTTCCTCGAC AATCTCACTA ACATATATGT TAGATTCAAC CGCAAGAGGT TAAAAGGCCG TACAGGAGAA GATGATTGTC ACATTGCTCT TTCAACTCTA TACAATGTGC TCCTCACTTC TTGCAAAGTG ATGACCCCTT TTACACCTTT TTTCACTGAG ACGCTATACC AGAATCTGCG GAAAGCATGT GAAGGTTCAG AGGAAAGCAT TCATTACTGC AGTTTTCCGG AGGAAGCTGA AGGAACGAGA GTGGAGAGGA TTGAGCAAAG TGTTACAAGG ATGATGACAA TCATCGATCT TGCTCGGAAC ATTCGTGAGC GTCACAAGCT ACCCTTGAAA ACTCCTCTAA AGGAAATCAC TGTAGTTCAT CCAGATGCAG AATTCTTGGA TGACATAACT GGGAAACTAA AAGAGTATGT CTTGGAAGAA CTTAATGTAA GATCTCTTGT GCCATGCAAT GATACTCTCA AGTATGCGTC TCTAAAAGCA GAACCAGATT TCAGTGTATT GGGAAAACGT CTTGGAAAGT CAATGAGGCT TGTTGCAAAA GAAGTTAAAG AAATGTCTCA GCAAGATATC TTAAGATTTG AGGAGACCGG AAAAGTTACT ATTGCTGGAC ACACGCTGGA GCTAACAGAT ATCAAGATTG TCAGGGTTTT CAAACGCCCG GATGGTTTGA AAGATACGGA GATTGATGCT AATGGAGATG GTGATGTTTT GGTGATTCTG AATCTACAGC CAGATGATTC GTTGTATGAA GCAGGTGTTG CTCGTGAGAT TGTCAATAGG ATCCAAAAAC TACGGAAGAA GTCAGGTTTG GAACCAACAG ACGTTGTGGA AGTGTACATT GAATCATTGG ACAAGGATGA ATCTGCTTTG CAACAAGTTC TGTGCTCTCA GGAACAATAC ATTAAGGATA CAATTGGTTC ATCTTTGCTT CCGTCTACGT TGATGCCATC TCATGCAGTG ATACTATCTG ACGAGAGTTT CCAAAACGTA TCAAAGCTGT CGTTTAAGAT TAGCTTGGCT CGGCCGGCTT TGAAGTTCAA CGAAGATGCT ATTCTTGCCT TGTTTTCAGG AGATGAGAAA TTTGCAAGGG GGCTCCAAGC GTACTTGTTA TCACGGGACC AATCGAATTT AAAATCAGAA TTCCAACAAG GAAATGGGAA GATAATAACT GTAAGTTGCA TTGAGAAGCT GCCAGTGGTG AGTGTGGTCC TTGGAGACCA TCTTCATTTG ACAGTCGGGG ACTACTTGTT GAGCACGTCA AACTCATGAG GGTACAAGTC TTTGGTAGG 
Length3549
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21331757.. 21337943
Download Sequence
A.thaliana
AGI-codeAT4G10320.1
DescriptiontRNA synthetase class I (I, L, M and V) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.87298 Ahg494129 Rad23 UV excision repair protein family
14.1421 Ahg891118 Endomembrane protein 70 protein family
14.6969 Ahg472806 decapping 5
14.9666 Ahg474538 oligouridylate-binding protein 1A
15.0997 Ahg930790
17.2047 Ahg470457 Nucleolar GTP-binding protein
24.7992 Ahg481452 KH domain-containing protein
25.4558 Ahg486060 alpha-soluble NSF attachment protein 2
29.2233 Ahg477362 DEAD box RNA helicase 1
29.3939 Ahg471284 RNA polymerases N / 8 kDa subunit
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression