Detail


ID : Ahg948120

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948120|scaffold_800007.1
Sequence
AGAAACTTGA TCGACAAATC ATGCTATGGA ACCGGTTGAA TGGAAGCAAG ACATTGTCGT ATCCCTCTGA TGACCGGACG ATCATAACAT CTGGTGCTGA TGGACAAGTA AGACTTGGTC AAATCCTAGA AAATGGTAAA GTGGAGACAA AAAGGCTAGG GAGGCACCAT GGTCGTGTGT ACAAGCTTGC TGTTTTGCCT GGAGATCCTA ATGTATTCTA CAGCTGTGGT GAAGATGGTT TTGTTCAACA TTTTGATGTA CGAAGCAACA GTGCCACTAT GGTTTTGTAT TCCTCTCCGT TCACACAAGG CTGCAGGAGA CATCACTCCA GTAGTAGGAT CAGATTGAAT TCTATTGCGA TAGATCCAAG GAATTCATAT TATCTTGCGG TTGGGGGTTC CGATGAATAC ACCAACAGTG TTCACATCAC GGGATTGGCA TATTCCAAAG CTGGAGAACT ACTGGTCTCT TACAATGACG AGCTCATTTA TCTGTTTGAG AAGAACATGG GTTATGGTTC GTCGCCGGTG TCTATATCTC CTGAGAATCT ACAAGAAATG GAAGAACCAC AGACTGCGGT CACATATTTA TATGGAAGAA GAAAGGGGGT AAAGCTTGTG CGGGCTATGG TGGGTGATAG ACGAGTGGTG AATCAGCTCG AGTTTCACCC ACACATACCG TTTTTTGCAT CCTGCGGGAT TGAAAAGAGC GTCAAGCTCT GGACACCATT GTCAAACGAT GTTCTTTCTC TGCCTGAAAA CATCGAAAAG GTGGTGGAAT CGAACCGAGT GGGGAGAGAA GACCAGTCGA GGGTGACACT GACTCCTGAT GTAATTATGC ATGTTCTCCG GCTACAGAGA CGTCAGACAT CTGCTTTTAC AGAAAGAAGA TACGTTTCAA CTGACATCGA CAGTGATGAA GGAAATGAAG CTCATTTCAT TGCAAGCTTA GAAGCCAAGG ACGATGAGTC TTCAGAAAGA GAATGTACTG TCAGCTAAGT CTTCAAGTAG TAGTGTGAT
Length1019
Protein Sequence
Protein Residue
Map Locationscaffold_8: 29888.. 31432
Download Sequence
A.thaliana
AGI-codeAT3G45620.2
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summaryThis gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase
Alias
Gene coexpression
MR
MR Locus Description
60.5888 Ahg486927 cation exchanger 4
73.2462 Ahg892184 F-box/RNI-like superfamily protein
76.1709 Ahg936039
97.55 Ahg915669 Glutathione S-transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression