Detail



ID : Ahg948566

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948566|scaffold_800453.1
Sequence
CGTGTACTCT GTTTCTCGCC ATGGCTTCGT CCTCCTCCTC CTCCGATCTC CCACCGCAAC AACATCAAGT ATTCATCAAT TTCCGTGGAG AAGATTTACG CCTGGGATTC GTCAGCCATC TCGTCGAAGC CTTAGAAAAC GATAACATAA AAGTCTTCAT CGACAATTAC GCAGACAAAG GCGAACCTCT AGAAACACTT TTAACTAAGA TACAAGAGTC TCGAATCGCT CTAGCTATCT TCTCTGGTAA GTACACAGAA TCAACATGGT GCTTGAGAGA GCTAGCGATG ATCAAAGATT GTGTTGAGAA AGGTAACCTT GTTGCTATTC CTATCTTCTA CAAGTTGGAT CCATCTACTG TTAGAGGTGT TAGAGGAAAG TTCGGTGATG CTTTTAGGGA TCTTGAGGAA CGTGATGTGT TGAAGAAGAA AGAGTGGAAA AAAGCTTTGA AGTGGATTCC TGACTTAATT GGCATCACTG TTCATGATAA AAGTCCTGAG AGTGAAATAC TTAACGAAAT CGTTAGGGAG GTTAAGAAAG TGTTGAAGAA AGTTCCATTG AAGGGAAGCC GAAATTTCTT TGTGGAACCA TCGGAGGGAA GTCGAAAGGT CGCTGTGGAT CGATCAGAAA TTATCGACAC TAGAACTTCG GCAGAAGGCG AAAAGGATAA GACTTTTGGA ATCAAACAAC AGTTGAAGGA GTTGGAAGAT AAGTTGGATC TTATTAAATA CAAGGGAACT CGTGTCATTG GAGTTGTTGG GATGCCGGGA ATTGGTAAAA CCACGCTGCT GAAAGAGCTC TATAAGACAT GGAAGGGAAA GTTTTCGAGG TATGCGTTAA TCGATCAAAT CCGTGGAAAG TCAAATAACT TCAGGTTAGA GTGCTTGCCT ACATTGCTTT TAGAGAAATT ACTACCGGAG TTGAATAATC CTCAAATAGA TAGTGTTGAA GAACCATACA AAACTCATAA GGGTCTGCTG CGCGAACGCA AAGTTCTTGT CGTTCTTGAT GATGTTAGTG AAAGGGAACA AATATATGCT CTTCTTGGGA AATATGATCT TCAAAATAAG CATGAGTGGA TCAAAGATGG CAGCAGGATT GTCATTGCGA CAAACGACAA GTCCTTATTG AAGGGTCTTG TTCATGACAC TTACGTGGTC CGACAGTTAA ACCACAGAGA CGGTTTACAA CTTTTTCGCT ATCATGCCTT TCATGATGAT CAAGCCATTA CTCCCAAGGT GGATTTCATG AAGCTTTCTG ATGAGTTCGT GCATTATGCC AGAGGCCATC CACTAGCTCT CAAAATATTG GGTAGAGAGC TTTATGAGAA AAATATGAAG CATTGGGAAA CAAAACTGAA AATACTCGCT CAAAGTCCCA CCACTTATAT TGGAGAGGTC GTGCAAGTAA GTTTTGATGA ATTGAGTATG GCGCAGAAAG ATGCATTTCT CGACATAGCC TGTTTCAGAT CGCAGGATGT GGATTATGTA GAAAGTTTAC TGGTTTCGTC TGACCCCGGA TCTGCTGAAG CAATTAAAGC TCTCAAGAAT AAGTTCCTGA TTGATACTTG TGACGGCCGT GTGGAGATGC ATGATCTACT GTATACATTT TCTAGGGAAC TTGATCTTAG AGCATCCACT CAAGGTGGTA GCAAACAACG GAGGTTGTGG CTCCAGCAAG ACATAATTAA TGTACAACAG AAAACAATGG GAGCTGCCGA TGTCAGAGGT ATTTTCCTAG ATTTGTCTGA AGTGAAGGGT GAAACAAGCT TAGATCGTGG ACACTTGAAA AAGATGTGCA ATCTCCGGTA TCTCAAATTC TACAATTCTC ATTGTCCTCA TGAATGTAAA ACCAACCATA AGATAAACAT GCCTGATGGA CTGGAGCTAC CATTGAAAGA GGTCCGATGC CTTCACTGGC TGAAATTCCC ATTGGAGGAA CTTCCAAACG ATTTTGACCC GATTAATCTC GTCGACCTTA AGCTGCCATA CAGTGAGATT GAACGACTTT GGGAGGGTGT TAAGGATACG CCTGTCTTAA AATGGGTTGA TCTCAATCAC TCAAGTAAGT TGTGCAGCTT GTCAGGATTA TCAAAGGCTC AAAATCTTCA AAGACTGAAC CTTGAAGGGT GCACAAGTCT TGAATCTCTT CGAGATGTGA ATTTGATGTC TTTGAAAACT CTCACCCTCA GCAACTGCTC AAACTTCAAG GAATTTCCAT TGATTCCAGA AAATCTAGAA GCTTTATACT TGGACGGAAC AGTGATAAGT CAACTTCCTG ACAACGTAGT GAACCTCAAG AGACTCGTCT TATTGAATAT GAAGGACTGC AAAATGCTGG AGAATATCCC GACATGTGTT GGTGAGCTGA AAGCTCTTCA AAAACTGATA CTCTCTGGTT GTTTAAAGCT CAAAGAATTT CCAGAAATCA ACAAGAGCTC TTTAAAAATT TTACTTCTGG ATGGGACATC CATCAAAACA ATGCCGCAGT TACCTTCAGT GCAGTATTTA TGCTTAAGCA GAAATGATCA GATCAGCTAC CTTCCGGTTG GCATCAATCA ACTTACATAT GTTCCAGAAT TGCCACCAAC CCTCCAGTAC TTAGATGCAC ACGGCTGTAG CTCACTGAAG AATGTTGCAA CACCACTGGC CCGTATCGTG TCAACCGTGC AGAACCATTG CACTTTCAAC TTCACCAACT GTGGTAACCT GGAGCAAGCT GCAAAGGAGG AAATCACATC ATATGCTCAA AGGAAATGCC AGTTACTTCC AGATGCTCGT AAACATTACA ACGAGGGTCT TAACTCAGAG GCTTTGTTCA GCACTTGTTT TCCTGGATGT GAAGTGCCTT CATGGTTTGG GCATGAAGTT GTTGGGTCTC TGTTGCAACG AAAACTCCTC CCACATTGGC ATGACAAGAG GCTTTCTGGA ATAGCTCTAT GTGCTGTAGT CTCATTTCTT GACAACCAAG ATCAAATCAG CTGCTTCTCG GTGACATGTA CCTTTAAAAT AAAAGCTGAA GACAAGTCTT GGGTCCCCTT TACTTGCCCA GTAGGAATTT GGACTAGAGA GGGAGACCAG AAAGACAAGA TTGAGTCAGA TCATGTTTTT ATAGCCTACA TTAGTTGCCC ACATTCAATA AGGTGTCTCG AAGACGAGAA TTCTGATAAA TGCAATTTTA CGGAAGCCTC CCTTGAGTTT ACGGTGACAA GTGGTACAAG TGGTGTAGGA GTATTCAAGG TGTTGAAGTG CGGATTGAGT TTGGTGTATG AAAATGATAA AAACAAAAAC AGTTCTCTTG AGGCAAAGTA TGAGGTTCCT ATTGAAGTGA GCTTTCAAAA ACCAGAACAC GGGATAATGG AGGAGGAAAA AAATAAAAAC AAAAGAAGAA GTGATGATAG AAGGCCAAAA AAGAAGCGAA AAACAAGAAG GGATGATATA ATGATAATAT CCACCGTCAC TCAAACTTGT GGTGCAAGTG TAGCTTCAAG AATGGAAGAT AAACTCAGTG GTTAAGCAAA TGGTTGAAAA ATCTC 
Length3535
Protein Sequence
Protein Residue
Map Locationscaffold_8: 2542844.. 2546831
Download Sequence
A.thaliana
AGI-codeAT5G45060.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
20.4206 Ahg948495 Disease resistance protein (TIR-NBS-LRR class) family
21.9773 Ahg480836 H(+)-ATPase 1
22.6936 Ahg930201
30 Ahg473540 Protein of unknown function (DUF567)
30.2324 Ahg478682 multidrug resistance-associated protein 3
34.8712 Ahg921441
36.8782 Ahg915659 Disease resistance protein (TIR-NBS-LRR class) family
40.2119 Ahg921474
47.8957 Ahg917708 Leucine-rich repeat protein kinase family protein
51.4296 Ahg349401 Protein of unknown function (DUF1423)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression