Detail



ID : Ahg950603

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950603|scaffold_802490.1
Sequence
TATCGTTTTG TAAGAAAAAG ATGGCGAAAG GAGCAGATTT TTTTTGTCTC CTTGTCTTGT TTTTGAGTTC AGTCTCAGCA ATCATAGATG ATCCTCAAAC TAAACAAGTG TATGTTGTCT ACATGGGCTC ACTTCCGTCT CAACTAGAAT ACGCACCAAT GTCGCATCAT ATGAGTATTC TTCAAGAAGT CACCGGAGAA AGTTCAGTGG AAGGTCGTTT AGTGAGAAGT TACAAGAGGA GTTTCAACGG TTTCGCGGCC CGGCTCACTG AGTCAGAACG GGAAAAAGTA GCCGAAATGG AGGGAGTTGT GTCTGTGTTT CCGAACATGA ACTACAAACT CCAAACGACG GCGTCTTGGG ATTTCTTGGG GTTGAAGGAA GGAAAGAATA CAAAGCATAA CTTAGCCATA GAGAGTGATA TTATCATCGG CGTCATCGAC TCTGGGATTT GGCCGGAATC CGATAGCTTT TCGGACAAAG GCTTTGGTCC TCCTCCTAAG AAATGGAAAG GTGTTTGTTC TGGCGGCAAA AACTTCACTT GCAACAATAA GTTGATCGGA GCAAGAGACT ACACAAGCGA AGGTGCTAGG GACCTCCAAG GGCACGGTAC TCACACAACG TCCACAGCTG CTGGAAACGC AGTTGCGAAC ACAAGTTTCT ATGGAATCGG TAATGGAACG GCTAGAGGCG GTGTTCCAGC CTCTAGAATC GCAGCTTACA AAGTCTGTTC CGAGAGGAAT TGTACCTCGG AATCTATACT ATCAGCGTTC GATGATGCGA TAGCAGACGG TGTTGACCTC ATCAGCATCT CTATCGCCCC AGGCTATCCC CACAAGTACG AAAAGGACGC AATTGCGATT GGGGCTTTTC ACGCTAATGT CAAAGGGATT CTTACTGTGA ACTCAGCCGG TAATTCGGGT CCGTTTCCTG CCACAATTGA GAGCGTAGCA CCGTGGATGT TAACTGTTGC AGCCAGCACC ACGAACCGTG GATTTTTCAC CAAAGTTGTT TTGGGAAACG GCAAGACACT TGTCGGGAGA TCAGTGAATG CTTTTGATCT GAAAGGAAAG AAGTATCCTC TTGTCTACGG AGCTAATTTC AACGAATCTC TTGTGCAAGG AAAGATCTTG GTTTCCACAT TCCCAACTAG TTCAGAAGTA GCTGTTGGAT CCATACTTAG AGACGGCTAC CAATACTATG CTTTCATTAG CTCCAAGCCC TTCTCTCTTC TACTACCAGA CGACTTTGAC TCTCTTGTCT CTTACATTAA CTCCACAAGG TCCCCACAAG GATCTTTTCT TAAAACTGAG GCATTCTTTA ATCAGACAGC TCCTACAGTT GCTTCCTTCT CTTCTCGCGG TCCAAACTTC GTCGCCGTTG ATCTTCTTAA GCCTGAGAGA CAATGGTTGG TGGATGGATT GCAGCCAGAT GTATCAGCAC CAGGAGTGGA GATTCTCGCA GCCTATTCAC CTTTGAGTTC ACCATCTGAG GAAGGGAGCG ATAAAAGACA TGTAAAGTAC TCTGTTTTGT CCGGAACCTC CATGGCTTGT CCACACGTTG CAGGCGTGGC TGCGTACATC AAGACTTTTC ATCCTGAATG GTCGCCTTCC GTGATCCAAT CTGCCATCAT GACAACCGCT TGGCCAATGA ATGCTAATAG AACTGGCTTC GCATCAACCG ATGTCCTTGC ATCAACCGAG TTTGCTTATG GAGCTGGACA TGTCGACCCA ATAGCCGCTC TTAATCCTGG ACTTGTCTAC AAACTGGACA AATCCGACCA CATCGCCTTT CTCTGCGGCT TGAATTACAC TTCGAAAACC CTTCAGCTCA TCGCCGGTGA AGCCGTCACT TGCAGTGGAA AGACCTTACC AAGAAACCTC AACTATCCTT CAATGTCAGC TAAAATTTAT GACTCTAATA ACTCCTTCAC CGTGACTTTC AAAAGAACCG TCACCAACCT CGGTACCCCC AACTCTACGT ACAAATCAAA GATCGTCTTA AACCGCGGAG CTAAGCTCAA TGTTAAGGTC TCGCCTAATG TTCTTTCTTT TAAAAGGGTG AACGAGAATC AGTCTTTCAC GGTAACTGTT TCAGGCAACA ATCTCAACCG AAAACTTCCT TCATCTGCAA ATTTAATCTG GTCTGATGGA ACACATAACG TGAGAAGTGT CATTGTTGTC TACATTGGTG ATTACTCGTG AGGCATTATT AGTTTACCAT ATT 
Length2223
Protein Sequence
Protein Residue
Map Locationscaffold_8: 13980905.. 13983855
Download Sequence
A.thaliana
AGI-codeAT5G58820.1
DescriptionSubtilisin-like serine endopeptidase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.82843 Ahg896827 transposable element gene
8.7178 Ahg948902 transposable element gene
11.6189 Ahg897443
13.5277 Ahg478378 Plant self-incompatibility protein S1 family
14.7309 Ahg937040
20.7846 Ahg914441
23.622 Ahg916350
26.1916 Ahg903465
34.2053 Ahg357682
34.2783 Ahg342163 delta vacuolar processing enzyme
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression